RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 TRAPPC3LQ5T215 181 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
CAPN1-210ENST00000527699 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
CAPN1-210ENST00000527699 POTECB2RU33 542 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 SOX10P56693 466 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 GRM1Q13255 1194 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-210ENST00000527699 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-210ENST00000527699 MORC1Q86VD1 984 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 NLGN1Q8N2Q7 840 aa13.58□□□□□ -0.24
CAPN1-210ENST00000527699 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
CAPN1-210ENST00000527699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
CAPN1-210ENST00000527699 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
CAPN1-210ENST00000527699 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
CAPN1-210ENST00000527699 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
CAPN1-210ENST00000527699 DGKZQ13574 1117 aa13.57□□□□□ -0.24
CAPN1-210ENST00000527699 CHRNA5P30532 468 aa13.56□□□□□ -0.24
CAPN1-210ENST00000527699 MTHFSP49914 203 aa13.56□□□□□ -0.24
CAPN1-210ENST00000527699 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
CAPN1-210ENST00000527699 CASP8AP2Q9UKL3 1982 aa13.56□□□□□ -0.24
CAPN1-210ENST00000527699 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-210ENST00000527699 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 RFC4P35249 363 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 C1orf141Q5JVX7 400 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 NFATC2IPQ8NCF5 419 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
CAPN1-210ENST00000527699 KDRP35968 1356 aa13.55□□□□□ -0.24
CAPN1-210ENST00000527699 GYS1P13807 737 aa13.54□□□□□ -0.24
CAPN1-210ENST00000527699 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
CAPN1-210ENST00000527699 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
CAPN1-210ENST00000527699 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
CAPN1-210ENST00000527699 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
CAPN1-210ENST00000527699 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
CAPN1-210ENST00000527699 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-210ENST00000527699 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
CAPN1-210ENST00000527699 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
CAPN1-210ENST00000527699 HMOX1P09601 288 aa13.52□□□□□ -0.25
CAPN1-210ENST00000527699 SLC39A6Q13433 755 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 LDHDQ86WU2 507 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
CAPN1-210ENST00000527699 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
CAPN1-210ENST00000527699 DLL1O00548 723 aa13.5□□□□□ -0.25
CAPN1-210ENST00000527699 EAPPQ56P03 285 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-210ENST00000527699 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
CAPN1-210ENST00000527699 IL13P35225 146 aa13.49□□□□□ -0.25
CAPN1-210ENST00000527699 DDR1Q08345 913 aa13.49□□□□□ -0.25
CAPN1-210ENST00000527699 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
CAPN1-210ENST00000527699 ERFEQ4G0M1 354 aa13.48□□□□□ -0.25
CAPN1-210ENST00000527699 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
CAPN1-210ENST00000527699 CAPNS2Q96L46 248 aa13.48□□□□□ -0.25
CAPN1-210ENST00000527699 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 ADRA2BP18089 450 aa13.47□□□□□ -0.25
CAPN1-210ENST00000527699 ECE1P42892 770 aa13.47□□□□□ -0.25
CAPN1-210ENST00000527699 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
CAPN1-210ENST00000527699 IQCA1LA6NCM1 817 aa13.46□□□□□ -0.25
CAPN1-210ENST00000527699 RNMTO43148 476 aaKnown RBP13.46□□□□□ -0.25
CAPN1-210ENST00000527699 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
CAPN1-210ENST00000527699 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
CAPN1-210ENST00000527699 ITGBL1O95965 494 aaPredicted RBP13.45□□□□□ -0.26
CAPN1-210ENST00000527699 AKAP4Q5JQC9 854 aa13.45□□□□□ -0.26
CAPN1-210ENST00000527699 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
CAPN1-210ENST00000527699 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
CAPN1-210ENST00000527699 SLC52A2Q9HAB3 445 aa13.45□□□□□ -0.26
CAPN1-210ENST00000527699 TJP1Q07157 1748 aa13.44□□□□□ -0.26
CAPN1-210ENST00000527699 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
CAPN1-210ENST00000527699 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
CAPN1-210ENST00000527699 ZPR1O75312 459 aa13.44□□□□□ -0.26
CAPN1-210ENST00000527699 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
CAPN1-210ENST00000527699 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
CAPN1-210ENST00000527699 NFKBIEO00221 500 aa13.43□□□□□ -0.26
CAPN1-210ENST00000527699 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
CAPN1-210ENST00000527699 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-210ENST00000527699 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
CAPN1-210ENST00000527699 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-210ENST00000527699 TM4SF1P30408 202 aa13.42□□□□□ -0.26
CAPN1-210ENST00000527699 CCDC24Q8N4L8 307 aa13.42□□□□□ -0.26
CAPN1-210ENST00000527699 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
CAPN1-210ENST00000527699 TAF1DQ9H5J8 278 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-210ENST00000527699 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
CAPN1-210ENST00000527699 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-210ENST00000527699 DICER1Q9UPY3 1922 aaKnown RBP13.42□□□□□ -0.26
CAPN1-210ENST00000527699 ZNF831Q5JPB2 1677 aa13.41□□□□□ -0.26
CAPN1-210ENST00000527699 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
CAPN1-210ENST00000527699 CA12O43570 354 aa13.41□□□□□ -0.26
CAPN1-210ENST00000527699 AOC2O75106 756 aa13.41□□□□□ -0.26
CAPN1-210ENST00000527699 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-210ENST00000527699 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
CAPN1-210ENST00000527699 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms