RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IL17REQ8NFR9 667 aa30.02■■■□□ 2.4
TRAPPC4-208ENST00000527680 KIAA1551Q9HCM1 1747 aa30.02■■■□□ 2.4
TRAPPC4-208ENST00000527680 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
TRAPPC4-208ENST00000527680 DALRD3Q5D0E6 543 aaKnown RBP30.01■■■□□ 2.39
TRAPPC4-208ENST00000527680 NUDCQ9Y266 331 aa30.01■■■□□ 2.39
TRAPPC4-208ENST00000527680 COL15A1P39059 1388 aa30■■■□□ 2.39
TRAPPC4-208ENST00000527680 COL3A1P02461 1466 aaPredicted RBP29.99■■■□□ 2.39
TRAPPC4-208ENST00000527680 CHRNA5P30532 468 aa29.99■■■□□ 2.39
TRAPPC4-208ENST00000527680 KCPQ6ZWJ8 1503 aa29.99■■■□□ 2.39
TRAPPC4-208ENST00000527680 PRKAR2BP31323 418 aa29.98■■■□□ 2.39
TRAPPC4-208ENST00000527680 ZNF790Q6PG37 636 aa29.98■■■□□ 2.39
TRAPPC4-208ENST00000527680 NFIXQ14938 502 aa29.97■■■□□ 2.39
TRAPPC4-208ENST00000527680 ZNF496Q96IT1 587 aaPredicted RBP29.97■■■□□ 2.39
TRAPPC4-208ENST00000527680 PHACTR3Q96KR7 559 aa29.97■■■□□ 2.39
TRAPPC4-208ENST00000527680 TEX13AQ9BXU3 409 aaPredicted RBP29.97■■■□□ 2.39
TRAPPC4-208ENST00000527680 ADAMTS7Q9UKP4 1686 aa29.96■■■□□ 2.39
TRAPPC4-208ENST00000527680 U2AF1L5P0DN76 240 aaPredicted RBP29.95■■■□□ 2.39
TRAPPC4-208ENST00000527680 U2AF1Q01081 240 aaKnown RBP eCLIP29.95■■■□□ 2.39
TRAPPC4-208ENST00000527680 ZNF330Q9Y3S2 320 aaPredicted RBP29.95■■■□□ 2.39
TRAPPC4-208ENST00000527680 A0A087WZG4 1122 aa29.94■■■□□ 2.38
TRAPPC4-208ENST00000527680 SERPINB2P05120 415 aa29.94■■■□□ 2.38
TRAPPC4-208ENST00000527680 NPM2Q86SE8 214 aaKnown RBP29.94■■■□□ 2.38
TRAPPC4-208ENST00000527680 C9orf131Q5VYM1 1079 aa29.93■■■□□ 2.38
TRAPPC4-208ENST00000527680 BICDL1Q6ZP65 573 aa29.93■■■□□ 2.38
TRAPPC4-208ENST00000527680 RSPH6AQ9H0K4 717 aa29.93■■■□□ 2.38
TRAPPC4-208ENST00000527680 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
TRAPPC4-208ENST00000527680 BRCA1P38398 1863 aaKnown RBP29.92■■■□□ 2.38
TRAPPC4-208ENST00000527680 FMNL2Q96PY5 1086 aa29.92■■■□□ 2.38
TRAPPC4-208ENST00000527680 BCL2L12Q9HB09 334 aa29.92■■■□□ 2.38
TRAPPC4-208ENST00000527680 HEG1Q9ULI3 1381 aa29.91■■■□□ 2.38
TRAPPC4-208ENST00000527680 BTBD11A6QL63 1104 aa29.91■■■□□ 2.38
TRAPPC4-208ENST00000527680 KIF3CO14782 793 aa29.91■■■□□ 2.38
TRAPPC4-208ENST00000527680 EIF5P55010 431 aaKnown RBP29.91■■■□□ 2.38
TRAPPC4-208ENST00000527680 RTF1Q92541 710 aaKnown RBP29.9■■■□□ 2.38
TRAPPC4-208ENST00000527680 UBR2Q8IWV8 1755 aa29.89■■■□□ 2.38
TRAPPC4-208ENST00000527680 ARFGEF1Q9Y6D6 1849 aa29.88■■■□□ 2.37
TRAPPC4-208ENST00000527680 HSPA6P17066 643 aa29.88■■■□□ 2.37
TRAPPC4-208ENST00000527680 TBC1D2BQ9UPU7 963 aa29.88■■■□□ 2.37
TRAPPC4-208ENST00000527680 KCNQ3O43525 872 aa29.86■■■□□ 2.37
TRAPPC4-208ENST00000527680 A1BGP04217 495 aa29.86■■■□□ 2.37
TRAPPC4-208ENST00000527680 AFDNP55196 1824 aaKnown RBP29.85■■■□□ 2.37
TRAPPC4-208ENST00000527680 RNF181Q9P0P0 153 aa29.85■■■□□ 2.37
TRAPPC4-208ENST00000527680 CEMIPQ8WUJ3 1361 aa29.85■■■□□ 2.37
TRAPPC4-208ENST00000527680 H0YIN7 160 aa29.84■■■□□ 2.37
TRAPPC4-208ENST00000527680 IL6STP40189 918 aaPredicted RBP29.84■■■□□ 2.37
TRAPPC4-208ENST00000527680 C2CD5Q86YS7 1000 aa29.84■■■□□ 2.37
TRAPPC4-208ENST00000527680 TBC1D9BQ66K14 1250 aa29.83■■■□□ 2.37
TRAPPC4-208ENST00000527680 MCM10Q7L590 875 aa29.83■■■□□ 2.37
TRAPPC4-208ENST00000527680 NMRK2Q9NPI5 230 aa29.83■■■□□ 2.37
TRAPPC4-208ENST00000527680 TOMM70O94826 608 aa29.82■■■□□ 2.36
TRAPPC4-208ENST00000527680 TTLL6Q8N841 843 aa29.82■■■□□ 2.36
TRAPPC4-208ENST00000527680 SIPA1L3O60292 1781 aaPredicted RBP29.81■■■□□ 2.36
TRAPPC4-208ENST00000527680 NPHP1O15259 732 aa29.8■■■□□ 2.36
TRAPPC4-208ENST00000527680 C16orf71Q8IYS4 520 aaPredicted RBP29.8■■■□□ 2.36
TRAPPC4-208ENST00000527680 USP16Q9Y5T5 823 aa29.8■■■□□ 2.36
TRAPPC4-208ENST00000527680 NEFMP07197 916 aa29.79■■■□□ 2.36
TRAPPC4-208ENST00000527680 DCTN1Q14203 1278 aa29.79■■■□□ 2.36
TRAPPC4-208ENST00000527680 ZNF622Q969S3 477 aaKnown RBP eCLIP29.78■■■□□ 2.36
TRAPPC4-208ENST00000527680 SETDB2Q96T68 719 aa29.78■■■□□ 2.36
TRAPPC4-208ENST00000527680 KDM2BQ8NHM5 1336 aa29.77■■■□□ 2.36
TRAPPC4-208ENST00000527680 CCDC24Q8N4L8 307 aa29.77■■■□□ 2.36
TRAPPC4-208ENST00000527680 NRXN2Q9P2S2 1712 aa29.76■■■□□ 2.36
TRAPPC4-208ENST00000527680 SNRPA1P09661 255 aaKnown RBP29.76■■■□□ 2.35
TRAPPC4-208ENST00000527680 PDE6BP35913 854 aa29.76■■■□□ 2.35
TRAPPC4-208ENST00000527680 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.35
TRAPPC4-208ENST00000527680 DZIP3Q86Y13 1208 aaKnown RBP29.76■■■□□ 2.35
TRAPPC4-208ENST00000527680 HTATSF1O43719 755 aaKnown RBP29.75■■■□□ 2.35
TRAPPC4-208ENST00000527680 RASSF7Q02833 373 aa29.75■■■□□ 2.35
TRAPPC4-208ENST00000527680 BRIP1Q9BX63 1249 aa29.75■■■□□ 2.35
TRAPPC4-208ENST00000527680 CEP350Q5VT06 3117 aa29.75■■■□□ 2.35
TRAPPC4-208ENST00000527680 PRAMEF22A3QJZ6 481 aa29.74■■■□□ 2.35
TRAPPC4-208ENST00000527680 CARMIL3Q8ND23 1372 aa29.74■■■□□ 2.35
TRAPPC4-208ENST00000527680 CAMTA2O94983 1202 aa29.73■■■□□ 2.35
TRAPPC4-208ENST00000527680 PRR5LQ6MZQ0 368 aa29.73■■■□□ 2.35
TRAPPC4-208ENST00000527680 RRAGCQ9HB90 399 aa29.73■■■□□ 2.35
TRAPPC4-208ENST00000527680 PDZRN3Q9UPQ7 1066 aa29.73■■■□□ 2.35
TRAPPC4-208ENST00000527680 SBF1O95248 1867 aa29.73■■■□□ 2.35
TRAPPC4-208ENST00000527680 LMNB1P20700 586 aa29.72■■■□□ 2.35
TRAPPC4-208ENST00000527680 TAF7Q15545 349 aaPredicted RBP29.72■■■□□ 2.35
TRAPPC4-208ENST00000527680 CNBD1Q8NA66 436 aa29.71■■■□□ 2.35
TRAPPC4-208ENST00000527680 ZNF219Q9P2Y4 722 aaPredicted RBP29.71■■■□□ 2.35
TRAPPC4-208ENST00000527680 APLP1P51693 650 aa29.7■■■□□ 2.35
TRAPPC4-208ENST00000527680 ST5P78524 1137 aa29.69■■■□□ 2.34
TRAPPC4-208ENST00000527680 MIS18AQ9NYP9 233 aa29.69■■■□□ 2.34
TRAPPC4-208ENST00000527680 RBM46Q8TBY0 533 aaKnown RBP29.68■■■□□ 2.34
TRAPPC4-208ENST00000527680 ZNF652Q9Y2D9 606 aa29.67■■■□□ 2.34
TRAPPC4-208ENST00000527680 C21orf2O43822 256 aa29.66■■■□□ 2.34
TRAPPC4-208ENST00000527680 CLEC4GQ6UXB4 293 aa29.66■■■□□ 2.34
TRAPPC4-208ENST00000527680 DLEC1Q9Y238 1755 aa29.66■■■□□ 2.34
TRAPPC4-208ENST00000527680 SCN7AQ01118 1682 aa29.66■■■□□ 2.34
TRAPPC4-208ENST00000527680 NBPF5PQ86XG9 351 aaPredicted RBP29.65■■■□□ 2.34
TRAPPC4-208ENST00000527680 PNNQ9H307 717 aaKnown RBP29.64■■■□□ 2.34
TRAPPC4-208ENST00000527680 ZC3H4Q9UPT8 1303 aaKnown RBP29.64■■■□□ 2.34
TRAPPC4-208ENST00000527680 CNKSR1Q969H4 720 aa29.63■■■□□ 2.33
TRAPPC4-208ENST00000527680 CCDC88AQ3V6T2 1871 aa29.62■■■□□ 2.33
TRAPPC4-208ENST00000527680 ANKRD31Q8N7Z5 1873 aa29.62■■■□□ 2.33
TRAPPC4-208ENST00000527680 NBPF26B4DH59 902 aa29.62■■■□□ 2.33
TRAPPC4-208ENST00000527680 NFKBIEO00221 500 aa29.62■■■□□ 2.33
TRAPPC4-208ENST00000527680 PRELPP51888 382 aa29.62■■■□□ 2.33
TRAPPC4-208ENST00000527680 NBPF10Q6P3W6 841 aaKnown RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms