RNA–Protein interactions for RNA: ENST00000527356.1

CCDC84-204, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-204ENST00000527356 EYA1Q99502 592 aa10.64□□□□□ -0.71
CCDC84-204ENST00000527356 USP44Q9H0E7 712 aa10.64□□□□□ -0.71
CCDC84-204ENST00000527356 FMN2Q9NZ56 1722 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 DYNC1I1O14576 645 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 POLA2Q14181 598 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 MTERF4Q7Z6M4 381 aaKnown RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 UNC5CLQ8IV45 518 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 FOXD4L4Q8WXT5 416 aaPredicted RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 TNRQ92752 1358 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 RPAP1Q9BWH6 1393 aaPredicted RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 PLEKHG1Q9ULL1 1385 aa10.63□□□□□ -0.71
CCDC84-204ENST00000527356 CEP170BQ9Y4F5 1589 aaPredicted RBP10.63□□□□□ -0.71
CCDC84-204ENST00000527356 KDM4FA0A1W2PPD8 638 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 SASS6Q6UVJ0 657 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 TTC14Q96N46 770 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 RAD50Q92878 1312 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 SGSM2O43147 1006 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 PI4K2BQ8TCG2 481 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
CCDC84-204ENST00000527356 UBR1Q8IWV7 1749 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 UQCRHLA0A096LP55 91 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 GADD45BO75293 160 aaPredicted RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 UQCRHP07919 91 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 UBTFL1P0CB47 393 aaPredicted RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 TAF7Q15545 349 aaPredicted RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 CCDC183Q5T5S1 534 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 RNF214Q8ND24 703 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 UPF3BQ9BZI7 483 aaKnown RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 RIMS1Q86UR5 1692 aaKnown RBP10.61□□□□□ -0.71
CCDC84-204ENST00000527356 CACNA1FO60840 1977 aa10.61□□□□□ -0.71
CCDC84-204ENST00000527356 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 ZSCAN22P10073 491 aaPredicted RBP10.6□□□□□ -0.71
CCDC84-204ENST00000527356 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 MLECQ14165 292 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 LSG1Q9H089 658 aaKnown RBP10.6□□□□□ -0.71
CCDC84-204ENST00000527356 IL25Q9H293 177 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 AMPHP49418 695 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 UBE2HP62256 183 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 KIF1BPQ96EK5 621 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 ESF1Q9H501 851 aaKnown RBP10.6□□□□□ -0.71
CCDC84-204ENST00000527356 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
CCDC84-204ENST00000527356 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.6□□□□□ -0.71
CCDC84-204ENST00000527356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC84-204ENST00000527356 NWD1Q149M9 1564 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 PPP1R42Q7Z4L9 355 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 KCNB2Q92953 911 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 CHMP4AQ9BY43 222 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 ATP6V1DQ9Y5K8 247 aa10.59□□□□□ -0.71
CCDC84-204ENST00000527356 CRYBG1Q9Y4K1 1723 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
CCDC84-204ENST00000527356 PTMAP06454 111 aaKnown RBP10.58□□□□□ -0.72
CCDC84-204ENST00000527356 HOXB7P09629 217 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
CCDC84-204ENST00000527356 HSP90AB4PQ58FF6 505 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
CCDC84-204ENST00000527356 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 IL1RAPL2Q9NP60 686 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 TTC41PQ6P2S7 1318 aa10.58□□□□□ -0.72
CCDC84-204ENST00000527356 STX6O43752 255 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 SYT1P21579 422 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 HOXC9P31274 260 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 AK2P54819 239 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 RUFY3Q7L099 469 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 FUCA2Q9BTY2 467 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 GDPD2Q9HCC8 539 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 USP54Q70EL1 1684 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 F13A1P00488 732 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
CCDC84-204ENST00000527356 LTKP29376 864 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 MYRIPQ8NFW9 859 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 PKNOX2Q96KN3 472 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
CCDC84-204ENST00000527356 SPTLC3Q9NUV7 552 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 FAM13BQ9NYF5 915 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 CNPY2Q9Y2B0 182 aa10.57□□□□□ -0.72
CCDC84-204ENST00000527356 CEMIPQ8WUJ3 1361 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 SOX12O15370 315 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 KDM4AO75164 1064 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 MTX1Q13505 466 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 VPS53Q5VIR6 699 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 HYPKQ9NX55 129 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
CCDC84-204ENST00000527356 DIP2AQ14689 1571 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms