RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNRNP35-204ENST00000527158 PIP4K2BP78356 416 aa20.21■□□□□ 0.83
SNRNP35-204ENST00000527158 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
SNRNP35-204ENST00000527158 PROSER3Q2NL68 480 aa20.2■□□□□ 0.82
SNRNP35-204ENST00000527158 USP44Q9H0E7 712 aa20.2■□□□□ 0.82
SNRNP35-204ENST00000527158 PHLPP1O60346 1717 aa20.2■□□□□ 0.82
SNRNP35-204ENST00000527158 UBTFL1P0CB47 393 aaPredicted RBP20.19■□□□□ 0.82
SNRNP35-204ENST00000527158 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
SNRNP35-204ENST00000527158 BEND3Q5T5X7 828 aa20.19■□□□□ 0.82
SNRNP35-204ENST00000527158 ADCY9O60503 1353 aa20.18■□□□□ 0.82
SNRNP35-204ENST00000527158 N4BP2Q86UW6 1770 aaPredicted RBP20.18■□□□□ 0.82
SNRNP35-204ENST00000527158 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
SNRNP35-204ENST00000527158 PDIA6Q15084 440 aa20.17■□□□□ 0.82
SNRNP35-204ENST00000527158 COL16A1Q07092 1604 aaPredicted RBP20.17■□□□□ 0.82
SNRNP35-204ENST00000527158 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
SNRNP35-204ENST00000527158 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
SNRNP35-204ENST00000527158 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
SNRNP35-204ENST00000527158 LRRFIP2Q9Y608 721 aaKnown RBP20.16■□□□□ 0.82
SNRNP35-204ENST00000527158 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
SNRNP35-204ENST00000527158 MYL6BP14649 208 aa20.15■□□□□ 0.82
SNRNP35-204ENST00000527158 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
SNRNP35-204ENST00000527158 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.81
SNRNP35-204ENST00000527158 C5P01031 1676 aa20.13■□□□□ 0.81
SNRNP35-204ENST00000527158 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
SNRNP35-204ENST00000527158 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
SNRNP35-204ENST00000527158 NUTM2BA6NNL0 878 aaPredicted RBP20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 NUTM2EB1AL46 878 aaPredicted RBP20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 NUTM2AQ8IVF1 878 aaPredicted RBP20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 EXOC5O00471 708 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 BMP2KLQ5H9B9 411 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
SNRNP35-204ENST00000527158 COPS6Q7L5N1 327 aa20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 C9orf78Q9NZ63 289 aaPredicted RBP20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 APBB1O00213 710 aa20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 DAXXQ9UER7 740 aaPredicted RBP20.11■□□□□ 0.81
SNRNP35-204ENST00000527158 PNMA6EA0A0J9YXQ4 647 aa20.1■□□□□ 0.81
SNRNP35-204ENST00000527158 SEC24BO95487 1268 aa20.1■□□□□ 0.81
SNRNP35-204ENST00000527158 NEXNQ0ZGT2 675 aa20.1■□□□□ 0.81
SNRNP35-204ENST00000527158 CDCA7Q9BWT1 371 aaPredicted RBP20.1■□□□□ 0.81
SNRNP35-204ENST00000527158 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
SNRNP35-204ENST00000527158 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
SNRNP35-204ENST00000527158 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
SNRNP35-204ENST00000527158 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
SNRNP35-204ENST00000527158 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
SNRNP35-204ENST00000527158 SSH3Q8TE77 659 aa20.08■□□□□ 0.8
SNRNP35-204ENST00000527158 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 PLCH1Q4KWH8 1693 aa20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 SMARCA5O60264 1052 aaPredicted RBP20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
SNRNP35-204ENST00000527158 SPATA31A1Q5TZJ5 1347 aa20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 METTL22Q9BUU2 404 aaPredicted RBP20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 LRRCC1Q9C099 1032 aa20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 TNS2Q63HR2 1409 aa20.06■□□□□ 0.8
SNRNP35-204ENST00000527158 SRGAP3O43295 1099 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 PIGBQ92521 554 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 PAPPAQ13219 1627 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 GRM8O00222 908 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 POLA2Q14181 598 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 LAMB4A4D0S4 1761 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 UBR2Q8IWV8 1755 aa20.05■□□□□ 0.8
SNRNP35-204ENST00000527158 GLI3P10071 1580 aa20.04■□□□□ 0.8
SNRNP35-204ENST00000527158 TEX13AQ9BXU3 409 aaPredicted RBP20.04■□□□□ 0.8
SNRNP35-204ENST00000527158 IBTKQ9P2D0 1353 aaPredicted RBP20.04■□□□□ 0.8
SNRNP35-204ENST00000527158 UTYO14607 1347 aa20.03■□□□□ 0.8
SNRNP35-204ENST00000527158 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
SNRNP35-204ENST00000527158 MYD88Q99836 296 aa20.03■□□□□ 0.8
SNRNP35-204ENST00000527158 TOGARAM1Q9Y4F4 1720 aa20.03■□□□□ 0.8
SNRNP35-204ENST00000527158 RAB11FIP3O75154 756 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 VSIG10Q8N0Z9 540 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 PLBD2Q8NHP8 589 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 NEURL1BA8MQ27 555 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 MTX1Q13505 466 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 DDB1Q16531 1140 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 TTC22Q5TAA0 569 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
SNRNP35-204ENST00000527158 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 NRAPQ86VF7 1730 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 HSP90AB4PQ58FF6 505 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 ATG3Q9NT62 314 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 A1BGP04217 495 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 GCKRQ14397 625 aa20.01■□□□□ 0.79
SNRNP35-204ENST00000527158 OTUD7AQ8TE49 926 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms