RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 NRXN2Q9P2S2 1712 aa21.83■■□□□ 1.08
CHEK1-209ENST00000527013 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
CHEK1-209ENST00000527013 DIAPH1O60610 1272 aaKnown RBP21.82■■□□□ 1.08
CHEK1-209ENST00000527013 APLP1P51693 650 aa21.82■■□□□ 1.08
CHEK1-209ENST00000527013 NMRK2Q9NPI5 230 aa21.82■■□□□ 1.08
CHEK1-209ENST00000527013 COL15A1P39059 1388 aa21.81■■□□□ 1.08
CHEK1-209ENST00000527013 NPC1L1Q9UHC9 1359 aa21.8■■□□□ 1.08
CHEK1-209ENST00000527013 CHRNA5P30532 468 aa21.8■■□□□ 1.08
CHEK1-209ENST00000527013 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
CHEK1-209ENST00000527013 AFDNP55196 1824 aaKnown RBP21.8■■□□□ 1.08
CHEK1-209ENST00000527013 NFIXQ14938 502 aa21.79■■□□□ 1.08
CHEK1-209ENST00000527013 SBF1O95248 1867 aa21.79■■□□□ 1.08
CHEK1-209ENST00000527013 RBM46Q8TBY0 533 aaKnown RBP21.78■■□□□ 1.08
CHEK1-209ENST00000527013 BCL2L12Q9HB09 334 aa21.78■■□□□ 1.08
CHEK1-209ENST00000527013 COL3A1P02461 1466 aaPredicted RBP21.77■■□□□ 1.08
CHEK1-209ENST00000527013 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
CHEK1-209ENST00000527013 DNAJC5GQ8N7S2 189 aa21.77■■□□□ 1.08
CHEK1-209ENST00000527013 DLEC1Q9Y238 1755 aa21.76■■□□□ 1.07
CHEK1-209ENST00000527013 RNF181Q9P0P0 153 aa21.76■■□□□ 1.07
CHEK1-209ENST00000527013 KDM2BQ8NHM5 1336 aa21.76■■□□□ 1.07
CHEK1-209ENST00000527013 EIF5P55010 431 aaKnown RBP21.75■■□□□ 1.07
CHEK1-209ENST00000527013 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
CHEK1-209ENST00000527013 SERPINB2P05120 415 aa21.74■■□□□ 1.07
CHEK1-209ENST00000527013 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
CHEK1-209ENST00000527013 STARD3NLO95772 234 aa21.73■■□□□ 1.07
CHEK1-209ENST00000527013 FSTL1Q12841 308 aa21.73■■□□□ 1.07
CHEK1-209ENST00000527013 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
CHEK1-209ENST00000527013 C16orf71Q8IYS4 520 aaPredicted RBP21.72■■□□□ 1.07
CHEK1-209ENST00000527013 TTC5Q8N0Z6 440 aa21.72■■□□□ 1.07
CHEK1-209ENST00000527013 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
CHEK1-209ENST00000527013 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
CHEK1-209ENST00000527013 A0A087WZG4 1122 aa21.71■■□□□ 1.07
CHEK1-209ENST00000527013 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
CHEK1-209ENST00000527013 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
CHEK1-209ENST00000527013 ZNF790Q6PG37 636 aa21.71■■□□□ 1.07
CHEK1-209ENST00000527013 ZNF496Q96IT1 587 aaPredicted RBP21.71■■□□□ 1.07
CHEK1-209ENST00000527013 TEX13AQ9BXU3 409 aaPredicted RBP21.71■■□□□ 1.07
CHEK1-209ENST00000527013 WDR90Q96KV7 1748 aa21.71■■□□□ 1.07
CHEK1-209ENST00000527013 HEG1Q9ULI3 1381 aa21.71■■□□□ 1.07
CHEK1-209ENST00000527013 TTLL6Q8N841 843 aa21.7■■□□□ 1.06
CHEK1-209ENST00000527013 TEFQ10587 303 aa21.69■■□□□ 1.06
CHEK1-209ENST00000527013 CEMIPQ8WUJ3 1361 aa21.69■■□□□ 1.06
CHEK1-209ENST00000527013 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
CHEK1-209ENST00000527013 LMNB1P20700 586 aa21.68■■□□□ 1.06
CHEK1-209ENST00000527013 RRAGCQ9HB90 399 aa21.68■■□□□ 1.06
CHEK1-209ENST00000527013 CARMIL3Q8ND23 1372 aa21.68■■□□□ 1.06
CHEK1-209ENST00000527013 SCN7AQ01118 1682 aa21.68■■□□□ 1.06
CHEK1-209ENST00000527013 H0YIN7 160 aa21.67■■□□□ 1.06
CHEK1-209ENST00000527013 RASSF7Q02833 373 aa21.67■■□□□ 1.06
CHEK1-209ENST00000527013 C2CD5Q86YS7 1000 aa21.67■■□□□ 1.06
CHEK1-209ENST00000527013 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
CHEK1-209ENST00000527013 IL6STP40189 918 aaPredicted RBP21.66■■□□□ 1.06
CHEK1-209ENST00000527013 PRELPP51888 382 aa21.66■■□□□ 1.06
CHEK1-209ENST00000527013 ANKRD31Q8N7Z5 1873 aa21.65■■□□□ 1.06
CHEK1-209ENST00000527013 GLTPD2A6NH11 291 aa21.65■■□□□ 1.06
CHEK1-209ENST00000527013 TBC1D9BQ66K14 1250 aa21.65■■□□□ 1.06
CHEK1-209ENST00000527013 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
CHEK1-209ENST00000527013 BRIP1Q9BX63 1249 aa21.65■■□□□ 1.06
CHEK1-209ENST00000527013 BICDL1Q6ZP65 573 aa21.64■■□□□ 1.05
CHEK1-209ENST00000527013 NFKBIEO00221 500 aa21.63■■□□□ 1.05
CHEK1-209ENST00000527013 SMC1BQ8NDV3 1235 aa21.63■■□□□ 1.05
CHEK1-209ENST00000527013 VEGFAP15692 232 aaPredicted RBP21.62■■□□□ 1.05
CHEK1-209ENST00000527013 PDE6BP35913 854 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 JMYQ8N9B5 988 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 KLRG1Q96E93 195 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 TBC1D2BQ9UPU7 963 aa21.62■■□□□ 1.05
CHEK1-209ENST00000527013 TIAM2Q8IVF5 1701 aa21.61■■□□□ 1.05
CHEK1-209ENST00000527013 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
CHEK1-209ENST00000527013 PRR5LQ6MZQ0 368 aa21.61■■□□□ 1.05
CHEK1-209ENST00000527013 CAMTA2O94983 1202 aa21.6■■□□□ 1.05
CHEK1-209ENST00000527013 A1BGP04217 495 aa21.6■■□□□ 1.05
CHEK1-209ENST00000527013 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
CHEK1-209ENST00000527013 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
CHEK1-209ENST00000527013 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
CHEK1-209ENST00000527013 COL11A2P13942 1736 aaPredicted RBP21.59■■□□□ 1.05
CHEK1-209ENST00000527013 HTRA3P83110 453 aa21.59■■□□□ 1.05
CHEK1-209ENST00000527013 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
CHEK1-209ENST00000527013 FER1L6Q2WGJ9 1857 aa21.58■■□□□ 1.05
CHEK1-209ENST00000527013 KCNQ3O43525 872 aa21.58■■□□□ 1.05
CHEK1-209ENST00000527013 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
CHEK1-209ENST00000527013 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.05
CHEK1-209ENST00000527013 LTBP3Q9NS15 1303 aa21.57■■□□□ 1.04
CHEK1-209ENST00000527013 DICER1Q9UPY3 1922 aaKnown RBP21.57■■□□□ 1.04
CHEK1-209ENST00000527013 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
CHEK1-209ENST00000527013 NPM2Q86SE8 214 aaKnown RBP21.57■■□□□ 1.04
CHEK1-209ENST00000527013 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.044e-6■□□□□ 9.9
CHEK1-209ENST00000527013 CNBD1Q8NA66 436 aa21.56■■□□□ 1.04
CHEK1-209ENST00000527013 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
CHEK1-209ENST00000527013 USP16Q9Y5T5 823 aa21.56■■□□□ 1.04
CHEK1-209ENST00000527013 POTECB2RU33 542 aa21.55■■□□□ 1.04
CHEK1-209ENST00000527013 C21orf2O43822 256 aa21.55■■□□□ 1.04
CHEK1-209ENST00000527013 STYK1Q6J9G0 422 aa21.55■■□□□ 1.04
CHEK1-209ENST00000527013 DPY19L2Q6NUT2 758 aa21.55■■□□□ 1.04
CHEK1-209ENST00000527013 CLEC4GQ6UXB4 293 aa21.55■■□□□ 1.04
CHEK1-209ENST00000527013 DZIP3Q86Y13 1208 aaKnown RBP21.55■■□□□ 1.04
CHEK1-209ENST00000527013 RGL2O15211 777 aa21.54■■□□□ 1.04
CHEK1-209ENST00000527013 SRGNP10124 158 aa21.54■■□□□ 1.04
CHEK1-209ENST00000527013 CCDC24Q8N4L8 307 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms