RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 DALRD3Q5D0E6 543 aaKnown RBP20.29■□□□□ 0.84
LTBP3-206ENST00000526825 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
LTBP3-206ENST00000526825 KCPQ6ZWJ8 1503 aa20.28■□□□□ 0.84
LTBP3-206ENST00000526825 NFIXQ14938 502 aa20.28■□□□□ 0.84
LTBP3-206ENST00000526825 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
LTBP3-206ENST00000526825 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
LTBP3-206ENST00000526825 U2SURPO15042 1029 aaKnown RBP20.26■□□□□ 0.83
LTBP3-206ENST00000526825 COL15A1P39059 1388 aa20.25■□□□□ 0.83
LTBP3-206ENST00000526825 TOMM70O94826 608 aa20.25■□□□□ 0.83
LTBP3-206ENST00000526825 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
LTBP3-206ENST00000526825 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
LTBP3-206ENST00000526825 ARFGEF1Q9Y6D6 1849 aa20.25■□□□□ 0.83
LTBP3-206ENST00000526825 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
LTBP3-206ENST00000526825 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
LTBP3-206ENST00000526825 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
LTBP3-206ENST00000526825 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-206ENST00000526825 NMRK2Q9NPI5 230 aa20.24■□□□□ 0.83
LTBP3-206ENST00000526825 STARD3NLO95772 234 aa20.23■□□□□ 0.83
LTBP3-206ENST00000526825 SERPINB2P05120 415 aa20.23■□□□□ 0.83
LTBP3-206ENST00000526825 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
LTBP3-206ENST00000526825 TTC5Q8N0Z6 440 aa20.23■□□□□ 0.83
LTBP3-206ENST00000526825 TEFQ10587 303 aa20.22■□□□□ 0.83
LTBP3-206ENST00000526825 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
LTBP3-206ENST00000526825 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-206ENST00000526825 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
LTBP3-206ENST00000526825 UBR2Q8IWV8 1755 aa20.19■□□□□ 0.82
LTBP3-206ENST00000526825 AFDNP55196 1824 aaKnown RBP20.19■□□□□ 0.82
LTBP3-206ENST00000526825 A0A087WZG4 1122 aa20.19■□□□□ 0.82
LTBP3-206ENST00000526825 RNF181Q9P0P0 153 aa20.19■□□□□ 0.82
LTBP3-206ENST00000526825 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
LTBP3-206ENST00000526825 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
LTBP3-206ENST00000526825 CEMIPQ8WUJ3 1361 aa20.18■□□□□ 0.82
LTBP3-206ENST00000526825 KCNQ3O43525 872 aa20.17■□□□□ 0.82
LTBP3-206ENST00000526825 PRKAR2BP31323 418 aa20.17■□□□□ 0.82
LTBP3-206ENST00000526825 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
LTBP3-206ENST00000526825 BICDL1Q6ZP65 573 aa20.17■□□□□ 0.82
LTBP3-206ENST00000526825 SBF1O95248 1867 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 A1BGP04217 495 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 APLP1P51693 650 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 TBC1D9BQ66K14 1250 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 DNAJC5GQ8N7S2 189 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 TTLL6Q8N841 843 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 RBM46Q8TBY0 533 aaKnown RBP20.16■□□□□ 0.82
LTBP3-206ENST00000526825 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 TBC1D2BQ9UPU7 963 aa20.16■□□□□ 0.82
LTBP3-206ENST00000526825 PRELPP51888 382 aa20.15■□□□□ 0.82
LTBP3-206ENST00000526825 C2CD5Q86YS7 1000 aa20.15■□□□□ 0.82
LTBP3-206ENST00000526825 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
LTBP3-206ENST00000526825 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 KDM2BQ8NHM5 1336 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 BTBD11A6QL63 1104 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 H0YIN7 160 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 RASSF7Q02833 373 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
LTBP3-206ENST00000526825 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
LTBP3-206ENST00000526825 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
LTBP3-206ENST00000526825 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
LTBP3-206ENST00000526825 USP16Q9Y5T5 823 aa20.13■□□□□ 0.81
LTBP3-206ENST00000526825 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-206ENST00000526825 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
LTBP3-206ENST00000526825 BRIP1Q9BX63 1249 aa20.12■□□□□ 0.81
LTBP3-206ENST00000526825 CAMTA2O94983 1202 aa20.11■□□□□ 0.81
LTBP3-206ENST00000526825 LMNB1P20700 586 aa20.11■□□□□ 0.81
LTBP3-206ENST00000526825 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
LTBP3-206ENST00000526825 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
LTBP3-206ENST00000526825 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-206ENST00000526825 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
LTBP3-206ENST00000526825 FSTL1Q12841 308 aa20.1■□□□□ 0.81
LTBP3-206ENST00000526825 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-206ENST00000526825 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
LTBP3-206ENST00000526825 PDZRN3Q9UPQ7 1066 aa20.1■□□□□ 0.81
LTBP3-206ENST00000526825 NFKBIEO00221 500 aa20.09■□□□□ 0.81
LTBP3-206ENST00000526825 PDE6BP35913 854 aa20.09■□□□□ 0.81
LTBP3-206ENST00000526825 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
LTBP3-206ENST00000526825 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
LTBP3-206ENST00000526825 MCM10Q7L590 875 aa20.08■□□□□ 0.81
LTBP3-206ENST00000526825 SETDB2Q96T68 719 aa20.08■□□□□ 0.81
LTBP3-206ENST00000526825 HTATSF1O43719 755 aaKnown RBP20.07■□□□□ 0.8
LTBP3-206ENST00000526825 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
LTBP3-206ENST00000526825 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
LTBP3-206ENST00000526825 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
LTBP3-206ENST00000526825 ZNF622Q969S3 477 aaKnown RBP eCLIP20.07■□□□□ 0.8
LTBP3-206ENST00000526825 DLEC1Q9Y238 1755 aa20.07■□□□□ 0.8
LTBP3-206ENST00000526825 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
LTBP3-206ENST00000526825 PIP4K2AP48426 406 aaPredicted RBP20.06■□□□□ 0.8
LTBP3-206ENST00000526825 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
LTBP3-206ENST00000526825 CLEC4GQ6UXB4 293 aa20.05■□□□□ 0.8
LTBP3-206ENST00000526825 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
LTBP3-206ENST00000526825 C21orf2O43822 256 aa20.04■□□□□ 0.8
LTBP3-206ENST00000526825 VEGFAP15692 232 aaPredicted RBP20.04■□□□□ 0.8
LTBP3-206ENST00000526825 HTRA3P83110 453 aa20.04■□□□□ 0.8
LTBP3-206ENST00000526825 POTECB2RU33 542 aa20.03■□□□□ 0.8
LTBP3-206ENST00000526825 NBPF26B4DH59 902 aa20.03■□□□□ 0.8
LTBP3-206ENST00000526825 SRGNP10124 158 aa20.03■□□□□ 0.8
LTBP3-206ENST00000526825 NBPF10Q6P3W6 841 aaKnown RBP20.03■□□□□ 0.8
LTBP3-206ENST00000526825 NBPF15Q8N660 670 aa20.03■□□□□ 0.8
LTBP3-206ENST00000526825 CNBD1Q8NA66 436 aa20.03■□□□□ 0.8
LTBP3-206ENST00000526825 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
LTBP3-206ENST00000526825 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
LTBP3-206ENST00000526825 SMC1BQ8NDV3 1235 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms