RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
CAPN1-204ENST00000526468 LAMB4A4D0S4 1761 aa15.91■□□□□ 0.14
CAPN1-204ENST00000526468 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
CAPN1-204ENST00000526468 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-204ENST00000526468 ZPR1O75312 459 aa15.89■□□□□ 0.13
CAPN1-204ENST00000526468 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
CAPN1-204ENST00000526468 INTS5Q6P9B9 1019 aaKnown RBP15.89■□□□□ 0.13
CAPN1-204ENST00000526468 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
CAPN1-204ENST00000526468 PIM2Q9P1W9 311 aa15.89■□□□□ 0.13
CAPN1-204ENST00000526468 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
CAPN1-204ENST00000526468 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
CAPN1-204ENST00000526468 CHRNA5P30532 468 aa15.88■□□□□ 0.13
CAPN1-204ENST00000526468 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
CAPN1-204ENST00000526468 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
CAPN1-204ENST00000526468 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
CAPN1-204ENST00000526468 USPL1Q5W0Q7 1092 aa15.88■□□□□ 0.13
CAPN1-204ENST00000526468 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-204ENST00000526468 LGR6Q9HBX8 967 aa15.87■□□□□ 0.13
CAPN1-204ENST00000526468 ZBTB1Q9Y2K1 713 aa15.87■□□□□ 0.13
CAPN1-204ENST00000526468 KCNA3P22001 575 aa15.86■□□□□ 0.13
CAPN1-204ENST00000526468 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
CAPN1-204ENST00000526468 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
CAPN1-204ENST00000526468 DIAPH1O60610 1272 aaKnown RBP15.85■□□□□ 0.13
CAPN1-204ENST00000526468 TOMM70O94826 608 aa15.85■□□□□ 0.13
CAPN1-204ENST00000526468 CYP19A1P11511 503 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-204ENST00000526468 APLP1P51693 650 aa15.85■□□□□ 0.13
CAPN1-204ENST00000526468 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
CAPN1-204ENST00000526468 C16orf71Q8IYS4 520 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-204ENST00000526468 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
CAPN1-204ENST00000526468 CNGB1Q14028 1251 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-204ENST00000526468 IFFO2Q5TF58 517 aa15.84■□□□□ 0.13
CAPN1-204ENST00000526468 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
CAPN1-204ENST00000526468 KDM2BQ8NHM5 1336 aa15.84■□□□□ 0.13
CAPN1-204ENST00000526468 RASSF7Q02833 373 aa15.83■□□□□ 0.12
CAPN1-204ENST00000526468 NFIXQ14938 502 aa15.83■□□□□ 0.12
CAPN1-204ENST00000526468 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
CAPN1-204ENST00000526468 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
CAPN1-204ENST00000526468 CANXP27824 592 aaKnown RBP15.81■□□□□ 0.12
CAPN1-204ENST00000526468 TM4SF1P30408 202 aa15.81■□□□□ 0.12
CAPN1-204ENST00000526468 KDM3BQ7LBC6 1761 aa15.81■□□□□ 0.12
CAPN1-204ENST00000526468 RBM46Q8TBY0 533 aaKnown RBP15.81■□□□□ 0.12
CAPN1-204ENST00000526468 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-204ENST00000526468 NUP98P52948 1817 aa15.8■□□□□ 0.12
CAPN1-204ENST00000526468 NPC1L1Q9UHC9 1359 aa15.8■□□□□ 0.12
CAPN1-204ENST00000526468 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
CAPN1-204ENST00000526468 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
CAPN1-204ENST00000526468 TEFQ10587 303 aa15.79■□□□□ 0.12
CAPN1-204ENST00000526468 BICDL1Q6ZP65 573 aa15.79■□□□□ 0.12
CAPN1-204ENST00000526468 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
CAPN1-204ENST00000526468 BCL2L12Q9HB09 334 aa15.79■□□□□ 0.12
CAPN1-204ENST00000526468 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
CAPN1-204ENST00000526468 STARD3NLO95772 234 aa15.78■□□□□ 0.12
CAPN1-204ENST00000526468 SERPINB2P05120 415 aa15.78■□□□□ 0.12
CAPN1-204ENST00000526468 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
CAPN1-204ENST00000526468 A0A087WZG4 1122 aa15.77■□□□□ 0.12
CAPN1-204ENST00000526468 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
CAPN1-204ENST00000526468 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-204ENST00000526468 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-204ENST00000526468 SCN4AP35499 1836 aa15.77■□□□□ 0.11
CAPN1-204ENST00000526468 LMNB1P20700 586 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 HTRA3P83110 453 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 FSTL1Q12841 308 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 ZNF790Q6PG37 636 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
CAPN1-204ENST00000526468 H0YIN7 160 aa15.74■□□□□ 0.11
CAPN1-204ENST00000526468 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
CAPN1-204ENST00000526468 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
CAPN1-204ENST00000526468 NPHP1O15259 732 aa15.73■□□□□ 0.11
CAPN1-204ENST00000526468 PRKAR2BP31323 418 aa15.73■□□□□ 0.11
CAPN1-204ENST00000526468 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
CAPN1-204ENST00000526468 SMC1BQ8NDV3 1235 aa15.73■□□□□ 0.11
CAPN1-204ENST00000526468 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
CAPN1-204ENST00000526468 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
CAPN1-204ENST00000526468 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
CAPN1-204ENST00000526468 IL17REQ8NFR9 667 aa15.72■□□□□ 0.11
CAPN1-204ENST00000526468 ZNF622Q969S3 477 aaKnown RBP eCLIP15.72■□□□□ 0.115e-7■■■□□ 17.3
CAPN1-204ENST00000526468 TBC1D2BQ9UPU7 963 aa15.72■□□□□ 0.11
CAPN1-204ENST00000526468 PCNTO95613 3336 aa15.72■□□□□ 0.11
CAPN1-204ENST00000526468 NFKBIEO00221 500 aa15.71■□□□□ 0.11
CAPN1-204ENST00000526468 IL6STP40189 918 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-204ENST00000526468 PRELPP51888 382 aa15.71■□□□□ 0.11
CAPN1-204ENST00000526468 PRR5LQ6MZQ0 368 aa15.71■□□□□ 0.11
CAPN1-204ENST00000526468 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
CAPN1-204ENST00000526468 CNBD1Q8NA66 436 aa15.71■□□□□ 0.11
CAPN1-204ENST00000526468 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-204ENST00000526468 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-204ENST00000526468 PDE6BP35913 854 aa15.7■□□□□ 0.1
CAPN1-204ENST00000526468 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
CAPN1-204ENST00000526468 KLRG1Q96E93 195 aa15.7■□□□□ 0.1
CAPN1-204ENST00000526468 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
CAPN1-204ENST00000526468 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
CAPN1-204ENST00000526468 ST5P78524 1137 aa15.69■□□□□ 0.1
CAPN1-204ENST00000526468 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
CAPN1-204ENST00000526468 LAMB2P55268 1798 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 CAMTA2O94983 1202 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 A1BGP04217 495 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-204ENST00000526468 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms