RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 A0A087WZG4 1122 aa16.42■□□□□ 0.22
COLCA1-202ENST00000526150 TEFQ10587 303 aa16.42■□□□□ 0.22
COLCA1-202ENST00000526150 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
COLCA1-202ENST00000526150 GAS2L2Q8NHY3 880 aa16.42■□□□□ 0.22
COLCA1-202ENST00000526150 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
COLCA1-202ENST00000526150 COL15A1P39059 1388 aa16.41■□□□□ 0.22
COLCA1-202ENST00000526150 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
COLCA1-202ENST00000526150 NPM2Q86SE8 214 aaKnown RBP16.41■□□□□ 0.22
COLCA1-202ENST00000526150 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
COLCA1-202ENST00000526150 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
COLCA1-202ENST00000526150 U2SURPO15042 1029 aaKnown RBP16.39■□□□□ 0.21
COLCA1-202ENST00000526150 IFFO2Q5TF58 517 aa16.39■□□□□ 0.21
COLCA1-202ENST00000526150 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
COLCA1-202ENST00000526150 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
COLCA1-202ENST00000526150 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
COLCA1-202ENST00000526150 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
COLCA1-202ENST00000526150 SERPINB2P05120 415 aa16.38■□□□□ 0.21
COLCA1-202ENST00000526150 CHRNA5P30532 468 aa16.38■□□□□ 0.21
COLCA1-202ENST00000526150 NFIXQ14938 502 aa16.38■□□□□ 0.21
COLCA1-202ENST00000526150 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
COLCA1-202ENST00000526150 PDZRN3Q9UPQ7 1066 aa16.38■□□□□ 0.21
COLCA1-202ENST00000526150 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
COLCA1-202ENST00000526150 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
COLCA1-202ENST00000526150 KCPQ6ZWJ8 1503 aa16.37■□□□□ 0.21
COLCA1-202ENST00000526150 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
COLCA1-202ENST00000526150 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
COLCA1-202ENST00000526150 H0YIN7 160 aa16.36■□□□□ 0.21
COLCA1-202ENST00000526150 FSTL1Q12841 308 aa16.36■□□□□ 0.21
COLCA1-202ENST00000526150 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
COLCA1-202ENST00000526150 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
COLCA1-202ENST00000526150 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
COLCA1-202ENST00000526150 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
COLCA1-202ENST00000526150 AFDNP55196 1824 aaKnown RBP16.34■□□□□ 0.21
COLCA1-202ENST00000526150 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
COLCA1-202ENST00000526150 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
COLCA1-202ENST00000526150 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.21
COLCA1-202ENST00000526150 LMNB1P20700 586 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 PDE6BP35913 854 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
COLCA1-202ENST00000526150 C2CD5Q86YS7 1000 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
COLCA1-202ENST00000526150 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 NRXN2Q9P2S2 1712 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 SBF1O95248 1867 aa16.33■□□□□ 0.2
COLCA1-202ENST00000526150 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
COLCA1-202ENST00000526150 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
COLCA1-202ENST00000526150 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
COLCA1-202ENST00000526150 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
COLCA1-202ENST00000526150 NPHP1O15259 732 aa16.31■□□□□ 0.2
COLCA1-202ENST00000526150 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
COLCA1-202ENST00000526150 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
COLCA1-202ENST00000526150 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
COLCA1-202ENST00000526150 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
COLCA1-202ENST00000526150 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
COLCA1-202ENST00000526150 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
COLCA1-202ENST00000526150 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
COLCA1-202ENST00000526150 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
COLCA1-202ENST00000526150 DLEC1Q9Y238 1755 aa16.29■□□□□ 0.2
COLCA1-202ENST00000526150 GLTPD2A6NH11 291 aa16.29■□□□□ 0.2
COLCA1-202ENST00000526150 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
COLCA1-202ENST00000526150 PRKAR2BP31323 418 aa16.29■□□□□ 0.2
COLCA1-202ENST00000526150 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
COLCA1-202ENST00000526150 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.2
COLCA1-202ENST00000526150 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
COLCA1-202ENST00000526150 RASSF7Q02833 373 aa16.28■□□□□ 0.2
COLCA1-202ENST00000526150 TBC1D9BQ66K14 1250 aa16.28■□□□□ 0.2
COLCA1-202ENST00000526150 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
COLCA1-202ENST00000526150 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
COLCA1-202ENST00000526150 ST5P78524 1137 aa16.27■□□□□ 0.2
COLCA1-202ENST00000526150 CNKSR1Q969H4 720 aa16.27■□□□□ 0.2
COLCA1-202ENST00000526150 SIPA1L3O60292 1781 aaPredicted RBP16.26■□□□□ 0.19
COLCA1-202ENST00000526150 NEFMP07197 916 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
COLCA1-202ENST00000526150 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
COLCA1-202ENST00000526150 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 CNBD1Q8NA66 436 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
COLCA1-202ENST00000526150 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
COLCA1-202ENST00000526150 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
COLCA1-202ENST00000526150 A1BGP04217 495 aa16.25■□□□□ 0.19
COLCA1-202ENST00000526150 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
COLCA1-202ENST00000526150 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
COLCA1-202ENST00000526150 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
COLCA1-202ENST00000526150 PHACTR3Q96KR7 559 aa16.25■□□□□ 0.19
COLCA1-202ENST00000526150 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
COLCA1-202ENST00000526150 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
COLCA1-202ENST00000526150 CCDC88AQ3V6T2 1871 aa16.23■□□□□ 0.19
COLCA1-202ENST00000526150 NFKBIEO00221 500 aa16.23■□□□□ 0.19
COLCA1-202ENST00000526150 RGL2O15211 777 aa16.23■□□□□ 0.19
COLCA1-202ENST00000526150 C21orf2O43822 256 aa16.23■□□□□ 0.19
COLCA1-202ENST00000526150 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
COLCA1-202ENST00000526150 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
COLCA1-202ENST00000526150 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
COLCA1-202ENST00000526150 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
COLCA1-202ENST00000526150 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms