RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 NLRP8Q86W28 1048 aa8.39□□□□□ -1.07
CSDE1-211ENST00000525970 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
CSDE1-211ENST00000525970 ARID3AQ99856 593 aa8.39□□□□□ -1.07
CSDE1-211ENST00000525970 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
CSDE1-211ENST00000525970 PIK3R2O00459 728 aa8.38□□□□□ -1.07
CSDE1-211ENST00000525970 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
CSDE1-211ENST00000525970 PROCP04070 461 aa8.38□□□□□ -1.07
CSDE1-211ENST00000525970 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
CSDE1-211ENST00000525970 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
CSDE1-211ENST00000525970 C2CD2LO14523 706 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 ARAFP10398 606 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 SMTNP53814 917 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
CSDE1-211ENST00000525970 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
CSDE1-211ENST00000525970 ADAM23O75077 832 aa8.36□□□□□ -1.07
CSDE1-211ENST00000525970 ATP4AP20648 1035 aa8.36□□□□□ -1.07
CSDE1-211ENST00000525970 CTBSQ01459 385 aa8.36□□□□□ -1.07
CSDE1-211ENST00000525970 ZCCHC2Q9C0B9 1178 aaKnown RBP8.36□□□□□ -1.07
CSDE1-211ENST00000525970 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
CSDE1-211ENST00000525970 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
CSDE1-211ENST00000525970 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
CSDE1-211ENST00000525970 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
CSDE1-211ENST00000525970 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-211ENST00000525970 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-211ENST00000525970 ZDHHC3Q9NYG2 299 aa8.35□□□□□ -1.07
CSDE1-211ENST00000525970 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 ATXN7O15265 892 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-211ENST00000525970 EPXP11678 715 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 AMPD1P23109 780 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 MTFR1Q15390 333 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 LINC00114Q6XXX2 140 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 PROSER2Q86WR7 435 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-211ENST00000525970 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
CSDE1-211ENST00000525970 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-211ENST00000525970 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-211ENST00000525970 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-211ENST00000525970 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
CSDE1-211ENST00000525970 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
CSDE1-211ENST00000525970 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
CSDE1-211ENST00000525970 A0A1W2PNR3 127 aa8.32□□□□□ -1.08
CSDE1-211ENST00000525970 A6NJY4 79 aa8.32□□□□□ -1.08
CSDE1-211ENST00000525970 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
CSDE1-211ENST00000525970 GNB5O14775 395 aa8.32□□□□□ -1.08
CSDE1-211ENST00000525970 COL8A1P27658 744 aa8.32□□□□□ -1.08
CSDE1-211ENST00000525970 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-211ENST00000525970 ADH6P28332 368 aa8.31□□□□□ -1.08
CSDE1-211ENST00000525970 TNP2Q05952 138 aa8.31□□□□□ -1.08
CSDE1-211ENST00000525970 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-211ENST00000525970 NOP53Q9NZM5 478 aaKnown RBP8.31□□□□□ -1.08
CSDE1-211ENST00000525970 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
CSDE1-211ENST00000525970 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 BACH1O14867 736 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 FAM157BP0CG42 384 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 MAPTP10636 758 aaKnown RBP8.3□□□□□ -1.08
CSDE1-211ENST00000525970 DGKGP49619 791 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 EML3Q32P44 896 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
CSDE1-211ENST00000525970 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
CSDE1-211ENST00000525970 BAG6P46379 1132 aa8.29□□□□□ -1.08
CSDE1-211ENST00000525970 GRIN2CQ14957 1233 aa8.29□□□□□ -1.08
CSDE1-211ENST00000525970 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
CSDE1-211ENST00000525970 NOD1Q9Y239 953 aa8.29□□□□□ -1.08
CSDE1-211ENST00000525970 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
CSDE1-211ENST00000525970 K7ELQ4 463 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-211ENST00000525970 LAMC2Q13753 1193 aa8.28□□□□□ -1.08
CSDE1-211ENST00000525970 SUV39H2Q9H5I1 410 aa8.28□□□□□ -1.08
CSDE1-211ENST00000525970 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
CSDE1-211ENST00000525970 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
CSDE1-211ENST00000525970 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.09
CSDE1-211ENST00000525970 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
CSDE1-211ENST00000525970 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
CSDE1-211ENST00000525970 ALG2Q9H553 416 aa8.27□□□□□ -1.09
CSDE1-211ENST00000525970 USP3Q9Y6I4 520 aa8.27□□□□□ -1.09
CSDE1-211ENST00000525970 PIK3CDO00329 1044 aa8.26□□□□□ -1.09
CSDE1-211ENST00000525970 SKIP12755 728 aa8.26□□□□□ -1.09
CSDE1-211ENST00000525970 CD33P20138 364 aa8.26□□□□□ -1.09
CSDE1-211ENST00000525970 GTF2IP78347 998 aa8.26□□□□□ -1.09
CSDE1-211ENST00000525970 ZNF468Q5VIY5 522 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-211ENST00000525970 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-211ENST00000525970 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
CSDE1-211ENST00000525970 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-211ENST00000525970 EFSO43281 561 aa8.25□□□□□ -1.09
CSDE1-211ENST00000525970 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
CSDE1-211ENST00000525970 MARK1Q9P0L2 795 aa8.25□□□□□ -1.09
CSDE1-211ENST00000525970 KLF15Q9UIH9 416 aa8.25□□□□□ -1.09
CSDE1-211ENST00000525970 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-211ENST00000525970 TEAD4Q15561 434 aa8.24□□□□□ -1.09
CSDE1-211ENST00000525970 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
CSDE1-211ENST00000525970 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
CSDE1-211ENST00000525970 PSME1Q06323 249 aa8.23□□□□□ -1.09
CSDE1-211ENST00000525970 CALR3Q96L12 384 aaKnown RBP8.23□□□□□ -1.09
CSDE1-211ENST00000525970 ZNF358Q9NW07 568 aa8.23□□□□□ -1.09
CSDE1-211ENST00000525970 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
CSDE1-211ENST00000525970 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
CSDE1-211ENST00000525970 NCOA4Q13772 614 aa8.22□□□□□ -1.09
CSDE1-211ENST00000525970 ADAMTS19Q8TE59 1207 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms