RNA–Protein interactions for RNA: ENST00000525957.1

ME3-204, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-204ENST00000525957 UBR2Q8IWV8 1755 aa20.96■□□□□ 0.95
ME3-204ENST00000525957 PER1O15534 1290 aaPredicted RBP20.96■□□□□ 0.95
ME3-204ENST00000525957 DALRD3Q5D0E6 543 aaKnown RBP20.96■□□□□ 0.95
ME3-204ENST00000525957 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
ME3-204ENST00000525957 NMRK2Q9NPI5 230 aa20.95■□□□□ 0.94
ME3-204ENST00000525957 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
ME3-204ENST00000525957 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
ME3-204ENST00000525957 TTC5Q8N0Z6 440 aa20.93■□□□□ 0.94
ME3-204ENST00000525957 TM4SF1P30408 202 aa20.92■□□□□ 0.94
ME3-204ENST00000525957 NFIXQ14938 502 aa20.92■□□□□ 0.94
ME3-204ENST00000525957 RNF181Q9P0P0 153 aa20.92■□□□□ 0.94
ME3-204ENST00000525957 NARFQ9UHQ1 456 aa20.91■□□□□ 0.94
ME3-204ENST00000525957 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
ME3-204ENST00000525957 BICDL1Q6ZP65 573 aa20.9■□□□□ 0.94
ME3-204ENST00000525957 TEFQ10587 303 aa20.89■□□□□ 0.93
ME3-204ENST00000525957 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.93
ME3-204ENST00000525957 NRXN2Q9P2S2 1712 aa20.89■□□□□ 0.93
ME3-204ENST00000525957 CARMIL3Q8ND23 1372 aa20.88■□□□□ 0.93
ME3-204ENST00000525957 RASSF7Q02833 373 aa20.88■□□□□ 0.93
ME3-204ENST00000525957 VSIG10Q8N0Z9 540 aa20.88■□□□□ 0.93
ME3-204ENST00000525957 SIPA1L3O60292 1781 aaPredicted RBP20.87■□□□□ 0.93
ME3-204ENST00000525957 DLEC1Q9Y238 1755 aa20.87■□□□□ 0.93
ME3-204ENST00000525957 GNAT3A8MTJ3 354 aa20.87■□□□□ 0.93
ME3-204ENST00000525957 TOMM70O94826 608 aa20.87■□□□□ 0.93
ME3-204ENST00000525957 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
ME3-204ENST00000525957 GAS2L2Q8NHY3 880 aa20.87■□□□□ 0.93
ME3-204ENST00000525957 ZNF496Q96IT1 587 aaPredicted RBP20.87■□□□□ 0.93
ME3-204ENST00000525957 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 STARD3NLO95772 234 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 SERPINB2P05120 415 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 SBF1O95248 1867 aa20.86■□□□□ 0.93
ME3-204ENST00000525957 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
ME3-204ENST00000525957 APLP1P51693 650 aa20.84■□□□□ 0.93
ME3-204ENST00000525957 ZNF790Q6PG37 636 aa20.84■□□□□ 0.93
ME3-204ENST00000525957 C2CD5Q86YS7 1000 aa20.84■□□□□ 0.93
ME3-204ENST00000525957 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
ME3-204ENST00000525957 PRKAR2BP31323 418 aa20.83■□□□□ 0.93
ME3-204ENST00000525957 TNRC6CQ9HCJ0 1690 aaKnown RBP20.83■□□□□ 0.92
ME3-204ENST00000525957 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
ME3-204ENST00000525957 TBC1D9BQ66K14 1250 aa20.82■□□□□ 0.92
ME3-204ENST00000525957 CCDC24Q8N4L8 307 aa20.82■□□□□ 0.92
ME3-204ENST00000525957 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
ME3-204ENST00000525957 TBC1D2BQ9UPU7 963 aa20.82■□□□□ 0.92
ME3-204ENST00000525957 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
ME3-204ENST00000525957 TIAM2Q8IVF5 1701 aa20.81■□□□□ 0.92
ME3-204ENST00000525957 A0A087WZG4 1122 aa20.81■□□□□ 0.92
ME3-204ENST00000525957 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
ME3-204ENST00000525957 COL11A2P13942 1736 aaPredicted RBP20.81■□□□□ 0.92
ME3-204ENST00000525957 WDR90Q96KV7 1748 aa20.81■□□□□ 0.92
ME3-204ENST00000525957 KCNQ3O43525 872 aa20.8■□□□□ 0.92
ME3-204ENST00000525957 TTLL6Q8N841 843 aa20.8■□□□□ 0.92
ME3-204ENST00000525957 FMNL2Q96PY5 1086 aa20.8■□□□□ 0.92
ME3-204ENST00000525957 RRAGCQ9HB90 399 aa20.8■□□□□ 0.92
ME3-204ENST00000525957 H0YIN7 160 aa20.79■□□□□ 0.92
ME3-204ENST00000525957 A1BGP04217 495 aa20.79■□□□□ 0.92
ME3-204ENST00000525957 IFFO2Q5TF58 517 aa20.79■□□□□ 0.92
ME3-204ENST00000525957 RBM46Q8TBY0 533 aaKnown RBP20.79■□□□□ 0.92
ME3-204ENST00000525957 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
ME3-204ENST00000525957 ZNF219Q9P2Y4 722 aaPredicted RBP20.79■□□□□ 0.92
ME3-204ENST00000525957 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
ME3-204ENST00000525957 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
ME3-204ENST00000525957 NPHP1O15259 732 aa20.78■□□□□ 0.92
ME3-204ENST00000525957 PIP4K2AP48426 406 aaPredicted RBP20.78■□□□□ 0.92
ME3-204ENST00000525957 HTRA3P83110 453 aa20.78■□□□□ 0.92
ME3-204ENST00000525957 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
ME3-204ENST00000525957 ZNF622Q969S3 477 aaKnown RBP eCLIP20.78■□□□□ 0.92
ME3-204ENST00000525957 PRELPP51888 382 aa20.77■□□□□ 0.92
ME3-204ENST00000525957 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
ME3-204ENST00000525957 CCDC88AQ3V6T2 1871 aa20.77■□□□□ 0.92
ME3-204ENST00000525957 BCORQ6W2J9 1755 aa20.77■□□□□ 0.91
ME3-204ENST00000525957 CACNA1SQ13698 1873 aa20.76■□□□□ 0.91
ME3-204ENST00000525957 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
ME3-204ENST00000525957 LMNB1P20700 586 aa20.76■□□□□ 0.91
ME3-204ENST00000525957 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
ME3-204ENST00000525957 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
ME3-204ENST00000525957 PRR5LQ6MZQ0 368 aa20.75■□□□□ 0.91
ME3-204ENST00000525957 MCM10Q7L590 875 aa20.75■□□□□ 0.91
ME3-204ENST00000525957 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
ME3-204ENST00000525957 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
ME3-204ENST00000525957 NFKBIEO00221 500 aa20.74■□□□□ 0.91
ME3-204ENST00000525957 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
ME3-204ENST00000525957 PPP2R1AP30153 589 aa20.73■□□□□ 0.91
ME3-204ENST00000525957 FSTL1Q12841 308 aa20.73■□□□□ 0.91
ME3-204ENST00000525957 DZIP3Q86Y13 1208 aaKnown RBP20.73■□□□□ 0.91
ME3-204ENST00000525957 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
ME3-204ENST00000525957 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
ME3-204ENST00000525957 C21orf2O43822 256 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 PDE6BP35913 854 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 DNAJC5GQ8N7S2 189 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 SETDB2Q96T68 719 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 USP16Q9Y5T5 823 aa20.72■□□□□ 0.91
ME3-204ENST00000525957 ZC3H4Q9UPT8 1303 aaKnown RBP20.72■□□□□ 0.91
ME3-204ENST00000525957 BRIP1Q9BX63 1249 aa20.71■□□□□ 0.91
ME3-204ENST00000525957 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
ME3-204ENST00000525957 GLTPD2A6NH11 291 aa20.69■□□□□ 0.9
ME3-204ENST00000525957 ST5P78524 1137 aa20.69■□□□□ 0.9
ME3-204ENST00000525957 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms