RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
HIF3A-209ENST00000525854 USPL1Q5W0Q7 1092 aa15.47■□□□□ 0.07
HIF3A-209ENST00000525854 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
HIF3A-209ENST00000525854 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.07
HIF3A-209ENST00000525854 A0A0G2JLW4 131 aa15.46■□□□□ 0.07
HIF3A-209ENST00000525854 WWC3Q9ULE0 1092 aa15.46■□□□□ 0.07
HIF3A-209ENST00000525854 UBR2Q8IWV8 1755 aa15.45■□□□□ 0.06
HIF3A-209ENST00000525854 TM4SF1P30408 202 aa15.45■□□□□ 0.06
HIF3A-209ENST00000525854 DDR1Q08345 913 aa15.45■□□□□ 0.06
HIF3A-209ENST00000525854 RALBP1Q15311 655 aa15.45■□□□□ 0.06
HIF3A-209ENST00000525854 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
HIF3A-209ENST00000525854 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
HIF3A-209ENST00000525854 POLRMTO00411 1230 aaKnown RBP15.44■□□□□ 0.06
HIF3A-209ENST00000525854 DPEP1P16444 411 aa15.44■□□□□ 0.06
HIF3A-209ENST00000525854 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
HIF3A-209ENST00000525854 MCM10Q7L590 875 aa15.44■□□□□ 0.06
HIF3A-209ENST00000525854 NPM2Q86SE8 214 aaKnown RBP15.44■□□□□ 0.06
HIF3A-209ENST00000525854 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
HIF3A-209ENST00000525854 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
HIF3A-209ENST00000525854 IL6STP40189 918 aaPredicted RBP15.42■□□□□ 0.06
HIF3A-209ENST00000525854 NFIXQ14938 502 aa15.42■□□□□ 0.06
HIF3A-209ENST00000525854 PIM2Q9P1W9 311 aa15.42■□□□□ 0.06
HIF3A-209ENST00000525854 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-209ENST00000525854 KCNQ3O43525 872 aa15.41■□□□□ 0.06
HIF3A-209ENST00000525854 SNRPA1P09661 255 aaKnown RBP15.41■□□□□ 0.06
HIF3A-209ENST00000525854 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
HIF3A-209ENST00000525854 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-209ENST00000525854 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
HIF3A-209ENST00000525854 ZNF330Q9Y3S2 320 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-209ENST00000525854 MAPK8IP3Q9UPT6 1336 aa15.41■□□□□ 0.06
HIF3A-209ENST00000525854 GIGYF1O75420 1035 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-209ENST00000525854 A1BGP04217 495 aa15.4■□□□□ 0.06
HIF3A-209ENST00000525854 DCTN1Q14203 1278 aa15.4■□□□□ 0.06
HIF3A-209ENST00000525854 DALRD3Q5D0E6 543 aaKnown RBP15.4■□□□□ 0.06
HIF3A-209ENST00000525854 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
HIF3A-209ENST00000525854 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
HIF3A-209ENST00000525854 ATP10DQ9P241 1426 aa15.4■□□□□ 0.06
HIF3A-209ENST00000525854 SERPINB2P05120 415 aa15.39■□□□□ 0.05
HIF3A-209ENST00000525854 KCNA3P22001 575 aa15.39■□□□□ 0.05
HIF3A-209ENST00000525854 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
HIF3A-209ENST00000525854 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
HIF3A-209ENST00000525854 ARHGAP27Q6ZUM4 889 aa15.38■□□□□ 0.05
HIF3A-209ENST00000525854 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
HIF3A-209ENST00000525854 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
HIF3A-209ENST00000525854 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
HIF3A-209ENST00000525854 ADCY9O60503 1353 aa15.37■□□□□ 0.05
HIF3A-209ENST00000525854 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
HIF3A-209ENST00000525854 N4BP2Q86UW6 1770 aaPredicted RBP15.37■□□□□ 0.05
HIF3A-209ENST00000525854 CHRNA5P30532 468 aa15.37■□□□□ 0.05
HIF3A-209ENST00000525854 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
HIF3A-209ENST00000525854 MYBBP1AQ9BQG0 1328 aaKnown RBP15.37■□□□□ 0.05
HIF3A-209ENST00000525854 CAMTA2O94983 1202 aa15.35■□□□□ 0.05
HIF3A-209ENST00000525854 TBC1D9BQ66K14 1250 aa15.35■□□□□ 0.05
HIF3A-209ENST00000525854 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
HIF3A-209ENST00000525854 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
HIF3A-209ENST00000525854 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
HIF3A-209ENST00000525854 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
HIF3A-209ENST00000525854 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
HIF3A-209ENST00000525854 PDZRN3Q9UPQ7 1066 aa15.34■□□□□ 0.05
HIF3A-209ENST00000525854 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
HIF3A-209ENST00000525854 H0YIN7 160 aa15.33■□□□□ 0.04
HIF3A-209ENST00000525854 RGL2O15211 777 aa15.33■□□□□ 0.04
HIF3A-209ENST00000525854 NPHP1O15259 732 aa15.33■□□□□ 0.04
HIF3A-209ENST00000525854 CLEC4GQ6UXB4 293 aa15.33■□□□□ 0.04
HIF3A-209ENST00000525854 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
HIF3A-209ENST00000525854 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-209ENST00000525854 PDE6BP35913 854 aa15.32■□□□□ 0.04
HIF3A-209ENST00000525854 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
HIF3A-209ENST00000525854 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
HIF3A-209ENST00000525854 TTLL6Q8N841 843 aa15.32■□□□□ 0.04
HIF3A-209ENST00000525854 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
HIF3A-209ENST00000525854 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
HIF3A-209ENST00000525854 BRCA1P38398 1863 aaKnown RBP15.31■□□□□ 0.04
HIF3A-209ENST00000525854 RIPK4P57078 832 aa15.31■□□□□ 0.04
HIF3A-209ENST00000525854 CNBD1Q8NA66 436 aa15.31■□□□□ 0.04
HIF3A-209ENST00000525854 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
HIF3A-209ENST00000525854 SCN7AQ01118 1682 aa15.31■□□□□ 0.04
HIF3A-209ENST00000525854 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
HIF3A-209ENST00000525854 EIF4A1P60842 406 aaKnown RBP15.3■□□□□ 0.04
HIF3A-209ENST00000525854 ST5P78524 1137 aa15.3■□□□□ 0.04
HIF3A-209ENST00000525854 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
HIF3A-209ENST00000525854 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
HIF3A-209ENST00000525854 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
HIF3A-209ENST00000525854 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
HIF3A-209ENST00000525854 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
HIF3A-209ENST00000525854 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
HIF3A-209ENST00000525854 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
HIF3A-209ENST00000525854 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
HIF3A-209ENST00000525854 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
HIF3A-209ENST00000525854 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
HIF3A-209ENST00000525854 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-209ENST00000525854 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
HIF3A-209ENST00000525854 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.04
HIF3A-209ENST00000525854 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-209ENST00000525854 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.04
HIF3A-209ENST00000525854 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
HIF3A-209ENST00000525854 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-209ENST00000525854 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
HIF3A-209ENST00000525854 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.04
HIF3A-209ENST00000525854 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms