RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
CTNND1-211ENST00000525821 A6NJY4 79 aa11.27□□□□□ -0.61
CTNND1-211ENST00000525821 PHKA2P46019 1235 aa11.27□□□□□ -0.61
CTNND1-211ENST00000525821 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
CTNND1-211ENST00000525821 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
CTNND1-211ENST00000525821 TIMMDC1Q9NPL8 285 aa11.27□□□□□ -0.61
CTNND1-211ENST00000525821 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
CTNND1-211ENST00000525821 MTFR1Q15390 333 aa11.26□□□□□ -0.61
CTNND1-211ENST00000525821 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
CTNND1-211ENST00000525821 NANOS1Q8WY41 292 aaKnown RBP11.26□□□□□ -0.61
CTNND1-211ENST00000525821 CDK2AP1O14519 115 aa11.25□□□□□ -0.61
CTNND1-211ENST00000525821 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
CTNND1-211ENST00000525821 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
CTNND1-211ENST00000525821 SIX5Q8N196 739 aa11.25□□□□□ -0.61
CTNND1-211ENST00000525821 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-211ENST00000525821 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
CTNND1-211ENST00000525821 ARID3CA6NKF2 412 aa11.24□□□□□ -0.61
CTNND1-211ENST00000525821 RFX1P22670 979 aa11.24□□□□□ -0.61
CTNND1-211ENST00000525821 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
CTNND1-211ENST00000525821 NIFKQ9BYG3 293 aaKnown RBP11.23□□□□□ -0.61
CTNND1-211ENST00000525821 CDC14CA4D256 554 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 DKK1O94907 266 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 F11P03951 625 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 GMPRP36959 345 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 CUX1P39880 1505 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 PTK7Q13308 1070 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 VWA5B2Q8N398 1253 aa11.22□□□□□ -0.61
CTNND1-211ENST00000525821 CUEDC1Q9NWM3 386 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-211ENST00000525821 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-211ENST00000525821 IQSEC3Q9UPP2 1182 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-211ENST00000525821 A0A1B0GTH6 734 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 M0R2N6 131 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 CRTC2Q53ET0 693 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-211ENST00000525821 SV2AQ7L0J3 742 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 CCDC97Q96F63 343 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-211ENST00000525821 SERPINA10Q9UK55 444 aa11.21□□□□□ -0.61
CTNND1-211ENST00000525821 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 WIPF1O43516 503 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 EPHA4P54764 986 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 GPR161Q8N6U8 529 aaKnown RBP11.2□□□□□ -0.62
CTNND1-211ENST00000525821 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 USP3Q9Y6I4 520 aa11.2□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L21D6R901 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 H7C1W4 665 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 PLA2G4AP47712 749 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 SEC13P55735 322 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 WDR97A6NE52 1622 aa11.19□□□□□ -0.62
CTNND1-211ENST00000525821 FOXK2Q01167 660 aa11.18□□□□□ -0.62
CTNND1-211ENST00000525821 DBN1Q16643 649 aa11.18□□□□□ -0.62
CTNND1-211ENST00000525821 GPAMQ9HCL2 828 aa11.18□□□□□ -0.62
CTNND1-211ENST00000525821 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
CTNND1-211ENST00000525821 MSX1P28360 303 aa11.17□□□□□ -0.62
CTNND1-211ENST00000525821 DPYDQ12882 1025 aa11.17□□□□□ -0.62
CTNND1-211ENST00000525821 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
CTNND1-211ENST00000525821 SLC9A9Q8IVB4 645 aa11.17□□□□□ -0.62
CTNND1-211ENST00000525821 TSEN2Q8NCE0 465 aaKnown RBP11.16□□□□□ -0.62
CTNND1-211ENST00000525821 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
CTNND1-211ENST00000525821 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
CTNND1-211ENST00000525821 GRIN2AQ12879 1464 aa11.16□□□□□ -0.62
CTNND1-211ENST00000525821 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 SRPK2P78362 688 aaKnown RBP11.14□□□□□ -0.63
CTNND1-211ENST00000525821 TEAD4Q15561 434 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 TBCELQ5QJ74 424 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 PGBD3Q8N328 593 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 PARP3Q9Y6F1 533 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 NUP160Q12769 1436 aa11.14□□□□□ -0.63
CTNND1-211ENST00000525821 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 FOXR1Q6PIV2 292 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 C1orf216Q8TAB5 229 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 ARXQ96QS3 562 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 COL25A1Q9BXS0 654 aaPredicted RBP11.13□□□□□ -0.63
CTNND1-211ENST00000525821 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
CTNND1-211ENST00000525821 TSPAN10Q9H1Z9 355 aaPredicted RBP11.13□□□□□ -0.63
CTNND1-211ENST00000525821 RUBCNLQ9H714 662 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
CTNND1-211ENST00000525821 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
CTNND1-211ENST00000525821 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-211ENST00000525821 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-211ENST00000525821 NOS2P35228 1153 aa11.12□□□□□ -0.63
CTNND1-211ENST00000525821 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
CTNND1-211ENST00000525821 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms