RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 RRAGCQ9HB90 399 aa19.71■□□□□ 0.75
ROM1-202ENST00000525801 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
ROM1-202ENST00000525801 TOMM70O94826 608 aa19.7■□□□□ 0.74
ROM1-202ENST00000525801 HTRA3P83110 453 aa19.7■□□□□ 0.74
ROM1-202ENST00000525801 SERPINB2P05120 415 aa19.69■□□□□ 0.74
ROM1-202ENST00000525801 TEFQ10587 303 aa19.69■□□□□ 0.74
ROM1-202ENST00000525801 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
ROM1-202ENST00000525801 COL15A1P39059 1388 aa19.69■□□□□ 0.74
ROM1-202ENST00000525801 KIAA1551Q9HCM1 1747 aa19.68■□□□□ 0.74
ROM1-202ENST00000525801 IFFO2Q5TF58 517 aa19.68■□□□□ 0.74
ROM1-202ENST00000525801 C2CD5Q86YS7 1000 aa19.68■□□□□ 0.74
ROM1-202ENST00000525801 TJP1Q07157 1748 aa19.68■□□□□ 0.74
ROM1-202ENST00000525801 PER1O15534 1290 aaPredicted RBP19.67■□□□□ 0.74
ROM1-202ENST00000525801 APLP1P51693 650 aa19.67■□□□□ 0.74
ROM1-202ENST00000525801 BCL2L12Q9HB09 334 aa19.67■□□□□ 0.74
ROM1-202ENST00000525801 STARD3NLO95772 234 aa19.66■□□□□ 0.74
ROM1-202ENST00000525801 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
ROM1-202ENST00000525801 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
ROM1-202ENST00000525801 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
ROM1-202ENST00000525801 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
ROM1-202ENST00000525801 NPHP1O15259 732 aa19.65■□□□□ 0.74
ROM1-202ENST00000525801 IL17REQ8NFR9 667 aa19.65■□□□□ 0.74
ROM1-202ENST00000525801 ZNF622Q969S3 477 aaKnown RBP eCLIP19.65■□□□□ 0.74
ROM1-202ENST00000525801 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
ROM1-202ENST00000525801 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.73
ROM1-202ENST00000525801 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
ROM1-202ENST00000525801 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
ROM1-202ENST00000525801 SCN11AQ9UI33 1791 aa19.63■□□□□ 0.73
ROM1-202ENST00000525801 H0YIN7 160 aa19.63■□□□□ 0.73
ROM1-202ENST00000525801 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
ROM1-202ENST00000525801 TBC1D9BQ66K14 1250 aa19.63■□□□□ 0.73
ROM1-202ENST00000525801 KCNQ3O43525 872 aa19.62■□□□□ 0.73
ROM1-202ENST00000525801 A1BGP04217 495 aa19.62■□□□□ 0.73
ROM1-202ENST00000525801 VSIG10Q8N0Z9 540 aa19.62■□□□□ 0.73
ROM1-202ENST00000525801 TTLL6Q8N841 843 aa19.62■□□□□ 0.73
ROM1-202ENST00000525801 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
ROM1-202ENST00000525801 CARMIL3Q8ND23 1372 aa19.61■□□□□ 0.73
ROM1-202ENST00000525801 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
ROM1-202ENST00000525801 PHACTR3Q96KR7 559 aa19.61■□□□□ 0.73
ROM1-202ENST00000525801 A0A087WZG4 1122 aa19.6■□□□□ 0.73
ROM1-202ENST00000525801 PRKAR2BP31323 418 aa19.6■□□□□ 0.73
ROM1-202ENST00000525801 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
ROM1-202ENST00000525801 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
ROM1-202ENST00000525801 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
ROM1-202ENST00000525801 C21orf2O43822 256 aa19.58■□□□□ 0.72
ROM1-202ENST00000525801 PRELPP51888 382 aa19.58■□□□□ 0.72
ROM1-202ENST00000525801 CFAP53Q96M91 514 aa19.58■□□□□ 0.72
ROM1-202ENST00000525801 FMNL2Q96PY5 1086 aa19.58■□□□□ 0.72
ROM1-202ENST00000525801 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
ROM1-202ENST00000525801 MRC1P22897 1456 aa19.57■□□□□ 0.72
ROM1-202ENST00000525801 U2AF1L5P0DN76 240 aaPredicted RBP19.57■□□□□ 0.72
ROM1-202ENST00000525801 LMNB1P20700 586 aa19.57■□□□□ 0.72
ROM1-202ENST00000525801 U2AF1Q01081 240 aaKnown RBP eCLIP19.57■□□□□ 0.72
ROM1-202ENST00000525801 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
ROM1-202ENST00000525801 PRAMEF22A3QJZ6 481 aa19.56■□□□□ 0.72
ROM1-202ENST00000525801 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
ROM1-202ENST00000525801 MCM10Q7L590 875 aa19.56■□□□□ 0.72
ROM1-202ENST00000525801 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
ROM1-202ENST00000525801 PRR5LQ6MZQ0 368 aa19.55■□□□□ 0.72
ROM1-202ENST00000525801 SETDB2Q96T68 719 aa19.55■□□□□ 0.72
ROM1-202ENST00000525801 TEX13AQ9BXU3 409 aaPredicted RBP19.55■□□□□ 0.72
ROM1-202ENST00000525801 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
ROM1-202ENST00000525801 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
ROM1-202ENST00000525801 USP16Q9Y5T5 823 aa19.54■□□□□ 0.72
ROM1-202ENST00000525801 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
ROM1-202ENST00000525801 NFKBIEO00221 500 aa19.53■□□□□ 0.72
ROM1-202ENST00000525801 PDE6BP35913 854 aa19.53■□□□□ 0.72
ROM1-202ENST00000525801 FSTL1Q12841 308 aa19.53■□□□□ 0.72
ROM1-202ENST00000525801 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
ROM1-202ENST00000525801 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
ROM1-202ENST00000525801 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
ROM1-202ENST00000525801 CNBD1Q8NA66 436 aa19.52■□□□□ 0.72
ROM1-202ENST00000525801 RSPH6AQ9H0K4 717 aa19.52■□□□□ 0.72
ROM1-202ENST00000525801 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
ROM1-202ENST00000525801 ARFGEF1Q9Y6D6 1849 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 GLTPD2A6NH11 291 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 VEGFAP15692 232 aaPredicted RBP19.51■□□□□ 0.71
ROM1-202ENST00000525801 ST5P78524 1137 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 SMC1BQ8NDV3 1235 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 BRIP1Q9BX63 1249 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 MIS18AQ9NYP9 233 aa19.51■□□□□ 0.71
ROM1-202ENST00000525801 AFDNP55196 1824 aaKnown RBP19.51■□□□□ 0.71
ROM1-202ENST00000525801 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
ROM1-202ENST00000525801 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
ROM1-202ENST00000525801 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
ROM1-202ENST00000525801 DPY19L2Q6NUT2 758 aa19.48■□□□□ 0.71
ROM1-202ENST00000525801 NBPF5PQ86XG9 351 aaPredicted RBP19.48■□□□□ 0.71
ROM1-202ENST00000525801 VIRMAQ69YN4 1812 aaKnown RBP19.47■□□□□ 0.71
ROM1-202ENST00000525801 CAPN15O75808 1086 aa19.47■□□□□ 0.71
ROM1-202ENST00000525801 NPC1L1Q9UHC9 1359 aa19.46■□□□□ 0.71
ROM1-202ENST00000525801 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
ROM1-202ENST00000525801 PRPF40BQ6NWY9 871 aaKnown RBP19.46■□□□□ 0.71
ROM1-202ENST00000525801 CNKSR1Q969H4 720 aa19.45■□□□□ 0.7
ROM1-202ENST00000525801 TAOK3Q9H2K8 898 aa19.45■□□□□ 0.7
ROM1-202ENST00000525801 DDNO94850 711 aaPredicted RBP19.44■□□□□ 0.7
ROM1-202ENST00000525801 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
ROM1-202ENST00000525801 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
ROM1-202ENST00000525801 CEMIPQ8WUJ3 1361 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms