RNA–Protein interactions for RNA: ENST00000525757.1

GRAMD1B-204, Transcript of GRAM domain containing 1B, humanhuman

TSL 3

Gene GRAMD1B, Length 2,471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-204ENST00000525757 PSME1Q06323 249 aa8.68□□□□□ -1.02
GRAMD1B-204ENST00000525757 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
GRAMD1B-204ENST00000525757 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
GRAMD1B-204ENST00000525757 FYB1O15117 783 aa8.68□□□□□ -1.02
GRAMD1B-204ENST00000525757 EN1Q05925 392 aaPredicted RBP8.68□□□□□ -1.02
GRAMD1B-204ENST00000525757 USP31Q70CQ4 1352 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 PIK3C2AO00443 1686 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 SPTLC1O15269 473 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 NHSL1Q5SYE7 1610 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 C9orf131Q5VYM1 1079 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 COG3Q96JB2 828 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 SBNO1A3KN83 1393 aa8.67□□□□□ -1.02
GRAMD1B-204ENST00000525757 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 SSFA2P28290 1259 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 TMED8Q6PL24 325 aaPredicted RBP8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 ALS2Q96Q42 1657 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 AATKQ6ZMQ8 1374 aa8.66□□□□□ -1.02
GRAMD1B-204ENST00000525757 CTDSPL2Q05D32 466 aa8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 TSNAXIP1Q2TAA8 658 aa8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 NCLP19338 710 aaKnown RBP8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 PPP2R1AP30153 589 aa8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 BIN2Q9UBW5 565 aaPredicted RBP8.65□□□□□ -1.02
GRAMD1B-204ENST00000525757 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 MARCH6O60337 910 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 HSPA1LP34931 641 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 BRINP3Q76B58 766 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 KRT28Q7Z3Y7 464 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 ADGRG1Q9Y653 693 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 PXDNQ92626 1479 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 AHDC1Q5TGY3 1603 aaPredicted RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 MARF1Q9Y4F3 1742 aaKnown RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 FOXO3O43524 673 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 NME9Q86XW9 330 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 MRS2Q9HD23 443 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 ROBO1Q9Y6N7 1651 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 MAP2P11137 1827 aaKnown RBP8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 ARHGEF10O15013 1369 aa8.64□□□□□ -1.03
GRAMD1B-204ENST00000525757 CNGB1Q14028 1251 aaPredicted RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 PADI6Q6TGC4 694 aa8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 NOL8Q76FK4 1167 aaKnown RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 ABTB2Q8N961 1025 aa8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 MED1Q15648 1581 aaPredicted RBP8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 KIF24Q5T7B8 1368 aa8.63□□□□□ -1.03
GRAMD1B-204ENST00000525757 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 LRRN4Q8WUT4 740 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 SLIT3O75094 1523 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 INSRP06213 1382 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 PIK3CDO00329 1044 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 OATP04181 439 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 DDX17Q92841 729 aaKnown RBP8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 PHRF1Q9P1Y6 1649 aaKnown RBP8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
GRAMD1B-204ENST00000525757 FOSBP53539 338 aa8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 CDK12Q9NYV4 1490 aaPredicted RBP8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 FBXO33Q7Z6M2 555 aa8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 SPATA31A3Q5VYP0 1347 aa8.61□□□□□ -1.03
GRAMD1B-204ENST00000525757 ATP9BO43861 1147 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 SF3A1Q15459 793 aaKnown RBP8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 CRYBG1Q9Y4K1 1723 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 USP19O94966 1318 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 VAMP1P23763 118 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 MTHFSP49914 203 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 PHLPP1O60346 1717 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 ABCC6O95255 1503 aa8.6□□□□□ -1.03
GRAMD1B-204ENST00000525757 PNPLA6Q8IY17 1366 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 NFAT5O94916 1531 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 LTN1O94822 1766 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 SHPRHQ149N8 1683 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 NUDCQ9Y266 331 aa8.59□□□□□ -1.03
GRAMD1B-204ENST00000525757 COL22A1Q8NFW1 1626 aaPredicted RBP8.59□□□□□ -1.04
GRAMD1B-204ENST00000525757 CD46P15529 392 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms