RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
ATM-208ENST00000525537 TSPAN10Q9H1Z9 355 aaPredicted RBP9.19□□□□□ -0.94
ATM-208ENST00000525537 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
ATM-208ENST00000525537 INHAP05111 366 aa9.18□□□□□ -0.94
ATM-208ENST00000525537 ITGAEP38570 1179 aa9.18□□□□□ -0.94
ATM-208ENST00000525537 HDLBPQ00341 1268 aaKnown RBP9.18□□□□□ -0.94
ATM-208ENST00000525537 DSC3Q14574 896 aa9.18□□□□□ -0.94
ATM-208ENST00000525537 VASH1Q7L8A9 365 aaPredicted RBP9.18□□□□□ -0.94
ATM-208ENST00000525537 DMRTB1Q96MA1 342 aa9.18□□□□□ -0.94
ATM-208ENST00000525537 SAP130Q9H0E3 1048 aa9.18□□□□□ -0.94
ATM-208ENST00000525537 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
ATM-208ENST00000525537 EIF1AXP47813 144 aaKnown RBP9.17□□□□□ -0.94
ATM-208ENST00000525537 LDLRAD1Q5T700 205 aa9.17□□□□□ -0.94
ATM-208ENST00000525537 STAG2Q8N3U4 1231 aa9.17□□□□□ -0.94
ATM-208ENST00000525537 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
ATM-208ENST00000525537 ATP13A2Q9NQ11 1180 aa9.17□□□□□ -0.94
ATM-208ENST00000525537 FAM181BA6NEQ2 426 aa9.16□□□□□ -0.94
ATM-208ENST00000525537 FZD6O60353 706 aa9.16□□□□□ -0.94
ATM-208ENST00000525537 PRPF40AO75400 957 aaKnown RBP9.16□□□□□ -0.94
ATM-208ENST00000525537 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
ATM-208ENST00000525537 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
ATM-208ENST00000525537 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
ATM-208ENST00000525537 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
ATM-208ENST00000525537 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
ATM-208ENST00000525537 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 PPP1R12BO60237 982 aaPredicted RBP9.15□□□□□ -0.94
ATM-208ENST00000525537 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
ATM-208ENST00000525537 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
ATM-208ENST00000525537 IGHA2P01877 340 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 EHHADHQ08426 723 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 FAM129BQ96TA1 746 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 ETNK1Q9HBU6 452 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 STIM2Q9P246 746 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
ATM-208ENST00000525537 TNFRSF10BO14763 440 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 MAPK8P45983 427 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 FOXK2Q01167 660 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 PDE3BQ13370 1112 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 TMC4Q7Z404 712 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 ALKBH8Q96BT7 664 aaKnown RBP9.14□□□□□ -0.95
ATM-208ENST00000525537 C2orf49Q9BVC5 232 aaPredicted RBP9.14□□□□□ -0.95
ATM-208ENST00000525537 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
ATM-208ENST00000525537 WNT7BP56706 349 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 AAMPQ13685 434 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 COX20Q5RI15 118 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 PIK3R5Q8WYR1 880 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
ATM-208ENST00000525537 MRS2Q9HD23 443 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
ATM-208ENST00000525537 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
ATM-208ENST00000525537 TTC24A2A3L6 582 aaPredicted RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 DHX9Q08211 1270 aaKnown RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 TRIM32Q13049 653 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 C9orf131Q5VYM1 1079 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 ABTB2Q8N961 1025 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
ATM-208ENST00000525537 PPP1R1BQ9UD71 204 aaPredicted RBP9.12□□□□□ -0.95
ATM-208ENST00000525537 A6NJY4 79 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 GPR182O15218 404 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 SORBS3O60504 671 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 GNRH1P01148 92 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 DAB2P98082 770 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 ATP2B2Q01814 1243 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 MTFR1Q15390 333 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 CYP2U1Q7Z449 544 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 METTL16Q86W50 562 aaKnown RBP9.11□□□□□ -0.95
ATM-208ENST00000525537 SLC9A9Q8IVB4 645 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 MYO19Q96H55 970 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 FAM161BQ96MY7 647 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 CDK15Q96Q40 435 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
ATM-208ENST00000525537 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
ATM-208ENST00000525537 SMPD1P17405 629 aa9.1□□□□□ -0.95
ATM-208ENST00000525537 PSMA6P60900 246 aaKnown RBP9.1□□□□□ -0.95
ATM-208ENST00000525537 SKOR1P84550 965 aa9.1□□□□□ -0.95
ATM-208ENST00000525537 SUZ12Q15022 739 aaKnown RBP9.1□□□□□ -0.95
ATM-208ENST00000525537 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
ATM-208ENST00000525537 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
ATM-208ENST00000525537 FSHRP23945 695 aa9.09□□□□□ -0.95
ATM-208ENST00000525537 SMTNP53814 917 aa9.09□□□□□ -0.95
ATM-208ENST00000525537 PSMD2Q13200 908 aa9.09□□□□□ -0.95
ATM-208ENST00000525537 TBCELQ5QJ74 424 aa9.09□□□□□ -0.95
ATM-208ENST00000525537 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
ATM-208ENST00000525537 LILRA1O75019 489 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 ZSCAN1Q8NBB4 408 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 SPATA32Q96LK8 384 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 VTI1BQ9UEU0 232 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 LRFN2Q9ULH4 789 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
ATM-208ENST00000525537 CDK11BP21127 795 aaKnown RBP9.07□□□□□ -0.96
ATM-208ENST00000525537 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms