RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CHL1O00533 1208 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 APBA3O96018 575 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 HSP90AB1P08238 724 aaKnown RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 EN1Q05925 392 aaPredicted RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 ITPK1Q13572 414 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 TAF7Q15545 349 aaPredicted RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 AMIGO3Q86WK7 504 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 ZNF496Q96IT1 587 aaPredicted RBP8.51□□□□□ -1.05
CD44-214ENST00000525211 MBIPQ9NS73 344 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 PAPPAQ13219 1627 aa8.51□□□□□ -1.05
CD44-214ENST00000525211 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 STK25O00506 426 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 NEFMP07197 916 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 TEFQ10587 303 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 CHRDL2Q6WN34 429 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 CAMKK2Q96RR4 588 aa8.5□□□□□ -1.05
CD44-214ENST00000525211 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 KDM3BQ7LBC6 1761 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 PIP4K2AP48426 406 aaPredicted RBP8.49□□□□□ -1.05
CD44-214ENST00000525211 EIF4A1P60842 406 aaKnown RBP8.49□□□□□ -1.05
CD44-214ENST00000525211 SLFN5Q08AF3 891 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 ZNF790Q6PG37 636 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 TRMT2AQ8IZ69 625 aaKnown RBP8.49□□□□□ -1.05
CD44-214ENST00000525211 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
CD44-214ENST00000525211 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.48□□□□□ -1.05
CD44-214ENST00000525211 ELL2O00472 640 aaPredicted RBP8.48□□□□□ -1.05
CD44-214ENST00000525211 LMOD3Q0VAK6 560 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 TXNRD1Q16881 649 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 WDR63Q8IWG1 891 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 DNAJC10Q8IXB1 793 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 LINC00116Q8NCU8 138 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 ZFP91Q96JP5 570 aaPredicted RBP8.48□□□□□ -1.05
CD44-214ENST00000525211 SGIP1Q9BQI5 828 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 ANO8Q9HCE9 1232 aaPredicted RBP8.48□□□□□ -1.05
CD44-214ENST00000525211 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 USP16Q9Y5T5 823 aa8.48□□□□□ -1.05
CD44-214ENST00000525211 LOC102724428A0A0B4J2F2 783 aa8.47□□□□□ -1.05
CD44-214ENST00000525211 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
CD44-214ENST00000525211 SIK1P57059 783 aa8.47□□□□□ -1.05
CD44-214ENST00000525211 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
CD44-214ENST00000525211 NECTIN2Q92692 538 aa8.47□□□□□ -1.05
CD44-214ENST00000525211 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
CD44-214ENST00000525211 UBR2Q8IWV8 1755 aa8.47□□□□□ -1.05
CD44-214ENST00000525211 C5P01031 1676 aa8.46□□□□□ -1.05
CD44-214ENST00000525211 TJP1Q07157 1748 aa8.46□□□□□ -1.05
CD44-214ENST00000525211 PLSCR1O15162 318 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
CD44-214ENST00000525211 ANXA1P04083 346 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 A1BGP04217 495 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 GOLGA2Q08379 1002 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 ZNF827Q17R98 1081 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 IL16Q14005 1332 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 ZBED9Q6R2W3 1325 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 LY75O60449 1722 aa8.46□□□□□ -1.06
CD44-214ENST00000525211 MYH14Q7Z406 1995 aaKnown RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 CYP19A1P11511 503 aaPredicted RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 GNAI1P63096 354 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 NBPF10Q6P3W6 841 aaKnown RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 NBPF15Q8N660 670 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
CD44-214ENST00000525211 STK24Q9Y6E0 443 aa8.45□□□□□ -1.06
CD44-214ENST00000525211 VAMP4O75379 141 aa8.44□□□□□ -1.06
CD44-214ENST00000525211 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
CD44-214ENST00000525211 PDIA6Q15084 440 aa8.44□□□□□ -1.06
CD44-214ENST00000525211 LRP10Q7Z4F1 713 aa8.44□□□□□ -1.06
CD44-214ENST00000525211 RREB1Q92766 1687 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 E9PSI1 815 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 GTPBP6O43824 516 aaPredicted RBP8.43□□□□□ -1.06
CD44-214ENST00000525211 EIF2S2P20042 333 aaKnown RBP8.43□□□□□ -1.06
CD44-214ENST00000525211 CRKLP46109 303 aaKnown RBP8.43□□□□□ -1.06
CD44-214ENST00000525211 TTC5Q8N0Z6 440 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 NGEFQ8N5V2 710 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
CD44-214ENST00000525211 FMNL2Q96PY5 1086 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 NUP188Q5SRE5 1749 aa8.43□□□□□ -1.06
CD44-214ENST00000525211 SNRPA1P09661 255 aaKnown RBP8.42□□□□□ -1.06
CD44-214ENST00000525211 BAG6P46379 1132 aa8.42□□□□□ -1.06
CD44-214ENST00000525211 G2E3Q7L622 706 aa8.42□□□□□ -1.06
CD44-214ENST00000525211 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
CD44-214ENST00000525211 BABAM1Q9NWV8 329 aa8.42□□□□□ -1.06
CD44-214ENST00000525211 TNNQ9UQP3 1299 aa8.42□□□□□ -1.06
CD44-214ENST00000525211 COL5A3P25940 1745 aaPredicted RBP8.42□□□□□ -1.06
CD44-214ENST00000525211 TAF1LQ8IZX4 1826 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms