RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 CICQ96RK0 1608 aaPredicted RBP16.77■□□□□ 0.27
SMCO4-202ENST00000525141 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
SMCO4-202ENST00000525141 KCNA3P22001 575 aa16.76■□□□□ 0.27
SMCO4-202ENST00000525141 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
SMCO4-202ENST00000525141 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
SMCO4-202ENST00000525141 TEFQ10587 303 aa16.75■□□□□ 0.27
SMCO4-202ENST00000525141 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
SMCO4-202ENST00000525141 MCM10Q7L590 875 aa16.75■□□□□ 0.27
SMCO4-202ENST00000525141 C4AP0C0L4 1744 aa16.74■□□□□ 0.27
SMCO4-202ENST00000525141 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
SMCO4-202ENST00000525141 TGFB2P61812 414 aa16.74■□□□□ 0.27
SMCO4-202ENST00000525141 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
SMCO4-202ENST00000525141 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
SMCO4-202ENST00000525141 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
SMCO4-202ENST00000525141 SIPA1L3O60292 1781 aaPredicted RBP16.74■□□□□ 0.27
SMCO4-202ENST00000525141 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
SMCO4-202ENST00000525141 DPEP1P16444 411 aa16.73■□□□□ 0.27
SMCO4-202ENST00000525141 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
SMCO4-202ENST00000525141 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
SMCO4-202ENST00000525141 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
SMCO4-202ENST00000525141 KIAA1551Q9HCM1 1747 aa16.73■□□□□ 0.27
SMCO4-202ENST00000525141 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
SMCO4-202ENST00000525141 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
SMCO4-202ENST00000525141 TTC5Q8N0Z6 440 aa16.72■□□□□ 0.27
SMCO4-202ENST00000525141 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
SMCO4-202ENST00000525141 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
SMCO4-202ENST00000525141 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
SMCO4-202ENST00000525141 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
SMCO4-202ENST00000525141 ZPR1O75312 459 aa16.71■□□□□ 0.27
SMCO4-202ENST00000525141 A1BGP04217 495 aa16.71■□□□□ 0.27
SMCO4-202ENST00000525141 NFIXQ14938 502 aa16.71■□□□□ 0.27
SMCO4-202ENST00000525141 C10orf71Q711Q0 1435 aa16.7■□□□□ 0.26
SMCO4-202ENST00000525141 N4BP2Q86UW6 1770 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-202ENST00000525141 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
SMCO4-202ENST00000525141 STARD3NLO95772 234 aa16.7■□□□□ 0.26
SMCO4-202ENST00000525141 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
SMCO4-202ENST00000525141 RALBP1Q15311 655 aa16.69■□□□□ 0.26
SMCO4-202ENST00000525141 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
SMCO4-202ENST00000525141 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
SMCO4-202ENST00000525141 COL15A1P39059 1388 aa16.68■□□□□ 0.26
SMCO4-202ENST00000525141 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
SMCO4-202ENST00000525141 RTF1Q92541 710 aaKnown RBP16.67■□□□□ 0.26
SMCO4-202ENST00000525141 TBC1D2BQ9UPU7 963 aa16.67■□□□□ 0.26
SMCO4-202ENST00000525141 SERPINB2P05120 415 aa16.66■□□□□ 0.26
SMCO4-202ENST00000525141 CHRNA5P30532 468 aa16.66■□□□□ 0.26
SMCO4-202ENST00000525141 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
SMCO4-202ENST00000525141 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
SMCO4-202ENST00000525141 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
SMCO4-202ENST00000525141 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
SMCO4-202ENST00000525141 A0A087WZG4 1122 aa16.64■□□□□ 0.25
SMCO4-202ENST00000525141 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
SMCO4-202ENST00000525141 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
SMCO4-202ENST00000525141 TBC1D9BQ66K14 1250 aa16.64■□□□□ 0.25
SMCO4-202ENST00000525141 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
SMCO4-202ENST00000525141 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
SMCO4-202ENST00000525141 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
SMCO4-202ENST00000525141 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SMCO4-202ENST00000525141 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
SMCO4-202ENST00000525141 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
SMCO4-202ENST00000525141 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
SMCO4-202ENST00000525141 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
SMCO4-202ENST00000525141 ADCY9O60503 1353 aa16.63■□□□□ 0.25
SMCO4-202ENST00000525141 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
SMCO4-202ENST00000525141 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
SMCO4-202ENST00000525141 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
SMCO4-202ENST00000525141 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
SMCO4-202ENST00000525141 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
SMCO4-202ENST00000525141 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
SMCO4-202ENST00000525141 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
SMCO4-202ENST00000525141 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
SMCO4-202ENST00000525141 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
SMCO4-202ENST00000525141 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
SMCO4-202ENST00000525141 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
SMCO4-202ENST00000525141 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
SMCO4-202ENST00000525141 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-202ENST00000525141 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
SMCO4-202ENST00000525141 CARMIL3Q8ND23 1372 aa16.58■□□□□ 0.24
SMCO4-202ENST00000525141 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
SMCO4-202ENST00000525141 RIPK4P57078 832 aa16.57■□□□□ 0.24
SMCO4-202ENST00000525141 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
SMCO4-202ENST00000525141 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
SMCO4-202ENST00000525141 NEFMP07197 916 aa16.56■□□□□ 0.24
SMCO4-202ENST00000525141 PRELPP51888 382 aa16.56■□□□□ 0.24
SMCO4-202ENST00000525141 C2CD5Q86YS7 1000 aa16.56■□□□□ 0.24
SMCO4-202ENST00000525141 PNISRQ8TF01 805 aaKnown RBP16.56■□□□□ 0.24
SMCO4-202ENST00000525141 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-202ENST00000525141 ARFGEF1Q9Y6D6 1849 aa16.55■□□□□ 0.24
SMCO4-202ENST00000525141 HLFQ16534 295 aa16.55■□□□□ 0.24
SMCO4-202ENST00000525141 SETDB2Q96T68 719 aa16.55■□□□□ 0.24
SMCO4-202ENST00000525141 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
SMCO4-202ENST00000525141 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
SMCO4-202ENST00000525141 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
SMCO4-202ENST00000525141 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
SMCO4-202ENST00000525141 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
SMCO4-202ENST00000525141 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
SMCO4-202ENST00000525141 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
SMCO4-202ENST00000525141 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
SMCO4-202ENST00000525141 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
SMCO4-202ENST00000525141 H0YIN7 160 aa16.53■□□□□ 0.24
SMCO4-202ENST00000525141 KIF3CO14782 793 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms