RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 COG3Q96JB2 828 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 VPS9D1Q9Y2B5 631 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
DEPDC1-205ENST00000525124 C5P01031 1676 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 HOXC9P31274 260 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
DEPDC1-205ENST00000525124 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
DEPDC1-205ENST00000525124 SYT17Q9BSW7 474 aa11.74□□□□□ -0.53
DEPDC1-205ENST00000525124 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
DEPDC1-205ENST00000525124 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
DEPDC1-205ENST00000525124 CGNL1Q0VF96 1302 aa11.74□□□□□ -0.53
DEPDC1-205ENST00000525124 MEGF6O75095 1541 aa11.73□□□□□ -0.53
DEPDC1-205ENST00000525124 NSD2O96028 1365 aa11.73□□□□□ -0.53
DEPDC1-205ENST00000525124 UTRNP46939 3433 aa11.73□□□□□ -0.53
DEPDC1-205ENST00000525124 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 AMPHP49418 695 aa11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 TMF1P82094 1093 aa11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 ZNF827Q17R98 1081 aa11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 BCL2L12Q9HB09 334 aa11.72□□□□□ -0.53
DEPDC1-205ENST00000525124 SMG6Q86US8 1419 aaKnown RBP11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 USP47Q96K76 1375 aa11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 FYB1O15117 783 aa11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 FOSBP53539 338 aa11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 ARXQ96QS3 562 aa11.71□□□□□ -0.53
DEPDC1-205ENST00000525124 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 INSRP06213 1382 aa11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 PDE4AP27815 886 aa11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 DDX54Q8TDD1 881 aaKnown RBP11.7□□□□□ -0.54
DEPDC1-205ENST00000525124 FLT4P35916 1363 aa11.69□□□□□ -0.54
DEPDC1-205ENST00000525124 LTV1Q96GA3 475 aaPredicted RBP11.69□□□□□ -0.54
DEPDC1-205ENST00000525124 SLC4A5Q9BY07 1137 aa11.69□□□□□ -0.54
DEPDC1-205ENST00000525124 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
DEPDC1-205ENST00000525124 C4BP0C0L5 1744 aa11.67□□□□□ -0.54
DEPDC1-205ENST00000525124 FBLN1P23142 703 aa11.67□□□□□ -0.54
DEPDC1-205ENST00000525124 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
DEPDC1-205ENST00000525124 POLD1P28340 1107 aa11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 RAPGEF4Q8WZA2 1011 aa11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 PLEKHG2Q9H7P9 1386 aa11.66□□□□□ -0.54
DEPDC1-205ENST00000525124 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 EVI5O60447 810 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 PTPREP23469 700 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 PTPN5P54829 565 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 SYTL4Q96C24 671 aaPredicted RBP11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 ZBED2Q9BTP6 218 aa11.65□□□□□ -0.54
DEPDC1-205ENST00000525124 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
DEPDC1-205ENST00000525124 ZNF784Q8NCA9 323 aaPredicted RBP11.64□□□□□ -0.55
DEPDC1-205ENST00000525124 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
DEPDC1-205ENST00000525124 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
DEPDC1-205ENST00000525124 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
DEPDC1-205ENST00000525124 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
DEPDC1-205ENST00000525124 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
DEPDC1-205ENST00000525124 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
DEPDC1-205ENST00000525124 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
DEPDC1-205ENST00000525124 FLAD1Q8NFF5 587 aa11.62□□□□□ -0.55
DEPDC1-205ENST00000525124 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
DEPDC1-205ENST00000525124 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
DEPDC1-205ENST00000525124 COL5A3P25940 1745 aaPredicted RBP11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 CYP27B1O15528 508 aa11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
DEPDC1-205ENST00000525124 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
DEPDC1-205ENST00000525124 PALLDQ8WX93 1383 aa11.6□□□□□ -0.55
DEPDC1-205ENST00000525124 KCNQ4P56696 695 aa11.6□□□□□ -0.55
DEPDC1-205ENST00000525124 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
DEPDC1-205ENST00000525124 SMARCC1Q92922 1105 aaPredicted RBP11.6□□□□□ -0.55
DEPDC1-205ENST00000525124 MFSD10Q14728 455 aa11.59□□□□□ -0.55
DEPDC1-205ENST00000525124 GPR162Q16538 588 aa11.59□□□□□ -0.55
DEPDC1-205ENST00000525124 THSD4Q6ZMP0 1018 aa11.59□□□□□ -0.55
DEPDC1-205ENST00000525124 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
DEPDC1-205ENST00000525124 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
DEPDC1-205ENST00000525124 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
DEPDC1-205ENST00000525124 SPG7Q9UQ90 795 aa11.58□□□□□ -0.56
DEPDC1-205ENST00000525124 GRIN3BO60391 1043 aa11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 NLGN2Q8NFZ4 835 aa11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 BRCA1P38398 1863 aaKnown RBP11.57□□□□□ -0.56
DEPDC1-205ENST00000525124 SCN11AQ9UI33 1791 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms