RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
CSDE1-208ENST00000524652 ADAMTS19Q8TE59 1207 aa6.3□□□□□ -1.4
CSDE1-208ENST00000524652 AIDAQ96BJ3 306 aa6.3□□□□□ -1.4
CSDE1-208ENST00000524652 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
CSDE1-208ENST00000524652 POM121CA8CG34 1229 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 BMP4P12644 408 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 TMEM132AQ24JP5 1023 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 SLCO4C1Q6ZQN7 724 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
CSDE1-208ENST00000524652 ZNF358Q9NW07 568 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 CABP1Q9NZU7 370 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 SCHIP1Q9P0W5 487 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-208ENST00000524652 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
CSDE1-208ENST00000524652 CNTNAP5Q8WYK1 1306 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 A0A1W2PNR3 127 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 USP17L3A6NCW0 530 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 USP17L4A6NCW7 530 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 IGHA1P01876 353 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 EPHA4P54764 986 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-208ENST00000524652 USP17L2Q6R6M4 530 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 USP17L1Q7RTZ2 530 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSDE1-208ENST00000524652 GALNT6Q8NCL4 622 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 UCN2Q96RP3 112 aa6.28□□□□□ -1.4
CSDE1-208ENST00000524652 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 C2CD2LO14523 706 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 ATXN7O15265 892 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-208ENST00000524652 ATP9BO43861 1147 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 ARAFP10398 606 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 FAM182BQ5T319 152 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 HDGFL1Q5TGJ6 251 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 C1orf229Q6ZS94 237 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-208ENST00000524652 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
CSDE1-208ENST00000524652 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 CTBSQ01459 385 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 TNP2Q05952 138 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 SAMD5Q5TGI4 173 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 ZIC5Q96T25 663 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 AVENQ9NQS1 362 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-208ENST00000524652 GGA1Q9UJY5 639 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 MKL2Q9ULH7 1088 aa6.26□□□□□ -1.41
CSDE1-208ENST00000524652 GPC6Q9Y625 555 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-208ENST00000524652 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 MAPTP10636 758 aaKnown RBP6.25□□□□□ -1.41
CSDE1-208ENST00000524652 TEAD4Q15561 434 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 GPAT2Q6NUI2 795 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 SLC9A9Q8IVB4 645 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 FNBP4Q8N3X1 1017 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-208ENST00000524652 TPCN2Q8NHX9 752 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 ZDHHC1Q8WTX9 485 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 L3MBTL2Q969R5 705 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 DCAF5Q96JK2 942 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
CSDE1-208ENST00000524652 M0R2N6 131 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 EPXP11678 715 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 NOS2P35228 1153 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 TXLNAP40222 546 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 SNRPNP63162 240 aaKnown RBP6.24□□□□□ -1.41
CSDE1-208ENST00000524652 CLDN10P78369 228 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 LAMC2Q13753 1193 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 CCDC102BQ68D86 513 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 BICDL1Q6ZP65 573 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 ALYREFQ86V81 257 aaKnown RBP6.24□□□□□ -1.41
CSDE1-208ENST00000524652 PROSER2Q86WR7 435 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-208ENST00000524652 LARGE2Q8N3Y3 721 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 KIAA1024Q9UPX6 916 aa6.24□□□□□ -1.41
CSDE1-208ENST00000524652 PALM3A6NDB9 673 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-208ENST00000524652 EML1O00423 815 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 PIK3R2O00459 728 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
CSDE1-208ENST00000524652 ZBTB7BO15156 539 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-208ENST00000524652 EFSO43281 561 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 ADH6P28332 368 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 PLA2G4EQ3MJ16 856 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 TNS4Q8IZW8 715 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 SIX5Q8N196 739 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 OGFOD1Q8N543 542 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 GLMNQ92990 594 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 PARP3Q9Y6F1 533 aa6.23□□□□□ -1.41
CSDE1-208ENST00000524652 SERTM1A2A2V5 107 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 NEURL1BA8MQ27 555 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 CD33P20138 364 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 AMPD1P23109 780 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 HIRAP54198 1017 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-208ENST00000524652 PSMA6P60900 246 aaKnown RBP6.22□□□□□ -1.41
CSDE1-208ENST00000524652 POTEAQ6S8J7 498 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 CLUAP1Q96AJ1 413 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 RRAGCQ9HB90 399 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 MKRN1Q9UHC7 482 aaKnown RBP6.22□□□□□ -1.41
CSDE1-208ENST00000524652 HCN2Q9UL51 889 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
CSDE1-208ENST00000524652 HOXB4P17483 251 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-208ENST00000524652 ZNF468Q5VIY5 522 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-208ENST00000524652 MARK1Q9P0L2 795 aa6.21□□□□□ -1.42
CSDE1-208ENST00000524652 CHMP3Q9Y3E7 222 aa6.21□□□□□ -1.42
CSDE1-208ENST00000524652 GNB5O14775 395 aa6.2□□□□□ -1.42
CSDE1-208ENST00000524652 DGKGP49619 791 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms