RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ZDHHC9Q9Y397 364 aa10.1□□□□□ -0.79
CHD7-202ENST00000524602 LRRFIP2Q9Y608 721 aaKnown RBP10.1□□□□□ -0.79
CHD7-202ENST00000524602 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
CHD7-202ENST00000524602 PKP1Q13835 747 aa10.1□□□□□ -0.79
CHD7-202ENST00000524602 POLA2Q14181 598 aa10.1□□□□□ -0.79
CHD7-202ENST00000524602 CAVIN1Q6NZI2 390 aaKnown RBP10.1□□□□□ -0.79
CHD7-202ENST00000524602 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
CHD7-202ENST00000524602 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 BRD1O95696 1058 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 HDGFL1Q5TGJ6 251 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 NFAT5O94916 1531 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 HSP90AB4PQ58FF6 505 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 ESCO1Q5FWF5 840 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 RILPL2Q969X0 211 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 ANO2Q9NQ90 1003 aa10.09□□□□□ -0.79
CHD7-202ENST00000524602 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
CHD7-202ENST00000524602 ZSCAN30Q86W11 494 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 IP6K1Q92551 441 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
CHD7-202ENST00000524602 HSPA4P34932 840 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 GPT2Q8TD30 523 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 NCAPD2Q15021 1401 aa10.08□□□□□ -0.8
CHD7-202ENST00000524602 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
CHD7-202ENST00000524602 LRSAM1Q6UWE0 723 aa10.07□□□□□ -0.8
CHD7-202ENST00000524602 TSHZ3Q63HK5 1081 aa10.07□□□□□ -0.8
CHD7-202ENST00000524602 EIF4A1P60842 406 aaKnown RBP10.06□□□□□ -0.8
CHD7-202ENST00000524602 PSME1Q06323 249 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 SYAP1Q96A49 352 aaPredicted RBP10.06□□□□□ -0.8
CHD7-202ENST00000524602 PDLIM2Q96JY6 352 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 PPP1R42Q7Z4L9 355 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 CNTROBQ8N137 903 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 ORAI2Q96SN7 254 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 ARID3AQ99856 593 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 RAD50Q92878 1312 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 KCNH5Q8NCM2 988 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 PI4K2BQ8TCG2 481 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
CHD7-202ENST00000524602 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
CHD7-202ENST00000524602 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 PROSER2Q86WR7 435 aaPredicted RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 MTX1Q13505 466 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 SGSM2O43147 1006 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 PHF14O94880 888 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 XPCQ01831 940 aaPredicted RBP10.05□□□□□ -0.8
CHD7-202ENST00000524602 AKAP4Q5JQC9 854 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
CHD7-202ENST00000524602 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
CHD7-202ENST00000524602 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 STRCP1A6NGW2 1772 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 SRGAP3O43295 1099 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 TMEM63CQ9P1W3 806 aa10.04□□□□□ -0.8
CHD7-202ENST00000524602 MCM5P33992 734 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 IL1RAPL2Q9NP60 686 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 ALDH1L1O75891 902 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
CHD7-202ENST00000524602 TPM2P07951 284 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 TERF1P54274 439 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
CHD7-202ENST00000524602 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 ERC1Q8IUD2 1116 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 CHPF2Q9P2E5 772 aa10.03□□□□□ -0.8
CHD7-202ENST00000524602 DBF4Q9UBU7 674 aaPredicted RBP10.03□□□□□ -0.8
CHD7-202ENST00000524602 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
CHD7-202ENST00000524602 KIAA1211Q6ZU35 1233 aa10.02□□□□□ -0.8
CHD7-202ENST00000524602 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.8
CHD7-202ENST00000524602 TRPM3Q9HCF6 1732 aaPredicted RBP10.02□□□□□ -0.8
CHD7-202ENST00000524602 SIPA1L3O60292 1781 aaPredicted RBP10.02□□□□□ -0.8
CHD7-202ENST00000524602 RGPD2P0DJD1 1756 aa10.02□□□□□ -0.8
CHD7-202ENST00000524602 TEFQ10587 303 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 NBPF6Q5VWK0 638 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
CHD7-202ENST00000524602 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 NBPF4Q96M43 638 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 TTC14Q96N46 770 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
CHD7-202ENST00000524602 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.02□□□□□ -0.81
CHD7-202ENST00000524602 ADCY9O60503 1353 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 SLIT3O75094 1523 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 ZBTB7CA1YPR0 619 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 PI4KAP2A4QPH2 592 aa10.02□□□□□ -0.81
CHD7-202ENST00000524602 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms