RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 C5P01031 1676 aa16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 SOCS7O14512 581 aa16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 PDE1AP54750 535 aa16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 BEND3Q5T5X7 828 aa16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 ANXA1P04083 346 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 TOM1O60784 492 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 SPRYD3Q8NCJ5 442 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 KIF2CQ99661 725 aa16.95■□□□□ 0.3
LDLRAD3-202ENST00000524419 SALL3Q9BXA9 1300 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 PHKG2P15735 406 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 MRC1P22897 1456 aa16.94■□□□□ 0.3
LDLRAD3-202ENST00000524419 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 MX1P20591 662 aa16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 SLC52A2Q9HAB3 445 aa16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 POLA2Q14181 598 aa16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
LDLRAD3-202ENST00000524419 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
LDLRAD3-202ENST00000524419 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
LDLRAD3-202ENST00000524419 PPP1R42Q7Z4L9 355 aa16.92■□□□□ 0.3
LDLRAD3-202ENST00000524419 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 AOX1Q06278 1338 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 REC8O95072 547 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 MCM4P33991 863 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 USP26Q9BXU7 913 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 AK9Q5TCS8 1911 aa16.91■□□□□ 0.3
LDLRAD3-202ENST00000524419 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
LDLRAD3-202ENST00000524419 ERC2O15083 957 aa16.89■□□□□ 0.3
LDLRAD3-202ENST00000524419 RABEP1Q15276 862 aa16.89■□□□□ 0.3
LDLRAD3-202ENST00000524419 DCAF5Q96JK2 942 aa16.89■□□□□ 0.3
LDLRAD3-202ENST00000524419 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.3
LDLRAD3-202ENST00000524419 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.29
LDLRAD3-202ENST00000524419 DDIT3P35638 169 aa16.89■□□□□ 0.29
LDLRAD3-202ENST00000524419 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 K7ELQ4 463 aaPredicted RBP16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 NFATC2IPQ8NCF5 419 aa16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
LDLRAD3-202ENST00000524419 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
LDLRAD3-202ENST00000524419 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
LDLRAD3-202ENST00000524419 CYP27B1O15528 508 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 TTC5Q8N0Z6 440 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 SOS2Q07890 1332 aaPredicted RBP16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 HSP90AA1P07900 732 aaKnown RBP16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 MTX1Q13505 466 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 PRDM11Q9NQV5 511 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
LDLRAD3-202ENST00000524419 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
LDLRAD3-202ENST00000524419 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
LDLRAD3-202ENST00000524419 PDIA6Q15084 440 aa16.85■□□□□ 0.29
LDLRAD3-202ENST00000524419 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
LDLRAD3-202ENST00000524419 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 RILPL2Q969X0 211 aa16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 DDX11L8A8MPP1 907 aa16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 FMNL2Q96PY5 1086 aa16.84■□□□□ 0.29
LDLRAD3-202ENST00000524419 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.29
LDLRAD3-202ENST00000524419 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 CABP4P57796 275 aa16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 LARP1Q6PKG0 1096 aaKnown RBP16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.28
LDLRAD3-202ENST00000524419 GRM8O00222 908 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 HSPA1LP34931 641 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 GLI3P10071 1580 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 UTYO14607 1347 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
LDLRAD3-202ENST00000524419 MYL6BP14649 208 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms