RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 USP17L17D6RBQ6 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L19D6RCP7 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L20D6RJB6 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 USP17L24Q0WX57 530 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 ECM1Q16610 540 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 LINC01559Q495D7 138 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 LINC00114Q6XXX2 140 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 TRMT44Q8IYL2 757 aaKnown RBP4.84□□□□□ -1.63
LINC01339-204ENST00000524094 MTMR7Q9Y216 660 aa4.84□□□□□ -1.63
LINC01339-204ENST00000524094 SENP3-EIF4A1A0A087X0R7 540 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 LZTS3O60299 673 aaPredicted RBP4.83□□□□□ -1.64
LINC01339-204ENST00000524094 MFAP1P55081 439 aaKnown RBP4.83□□□□□ -1.64
LINC01339-204ENST00000524094 OCLNQ16625 522 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 MAP7D1Q3KQU3 841 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 NBPF14Q5TI25 921 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 RNF135Q8IUD6 432 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 ANKMY2Q8IV38 441 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 CLP1Q92989 425 aaKnown RBP4.83□□□□□ -1.64
LINC01339-204ENST00000524094 ZNF428Q96B54 188 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 TPSG1Q9NRR2 321 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 CUEDC1Q9NWM3 386 aaPredicted RBP4.83□□□□□ -1.64
LINC01339-204ENST00000524094 IVNS1ABPQ9Y6Y0 642 aa4.83□□□□□ -1.64
LINC01339-204ENST00000524094 GPR25O00155 361 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 RASA1P20936 1047 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 GRM5P41594 1212 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 PDE4CQ08493 712 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 DPYDQ12882 1025 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 NR5A1Q13285 461 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 SLFNL1Q499Z3 407 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 ZBTB33Q86T24 672 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 OGFOD1Q8N543 542 aa4.82□□□□□ -1.64
LINC01339-204ENST00000524094 ATP5J2-PTCD1G3V325 749 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 PIK3R2O00459 728 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 SCTRP47872 440 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 ARID5BQ14865 1188 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 TAS1R3Q7RTX0 852 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 SIX5Q8N196 739 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 CDK15Q96Q40 435 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 CARD14Q9BXL6 1004 aa4.81□□□□□ -1.64
LINC01339-204ENST00000524094 CCDC9Q9Y3X0 531 aaKnown RBP4.81□□□□□ -1.64
LINC01339-204ENST00000524094 MAGEB6P1A0A0J9YX57 407 aa4.8□□□□□ -1.64
LINC01339-204ENST00000524094 GNB5O14775 395 aa4.8□□□□□ -1.64
LINC01339-204ENST00000524094 CAPN12Q6ZSI9 719 aa4.8□□□□□ -1.64
LINC01339-204ENST00000524094 NPM2Q86SE8 214 aaKnown RBP4.8□□□□□ -1.64
LINC01339-204ENST00000524094 BPHLQ86WA6 291 aaPredicted RBP4.8□□□□□ -1.64
LINC01339-204ENST00000524094 DZIP3Q86Y13 1208 aaKnown RBP4.8□□□□□ -1.64
LINC01339-204ENST00000524094 LARGE2Q8N3Y3 721 aa4.8□□□□□ -1.64
LINC01339-204ENST00000524094 SFI1A8K8P3 1242 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 TMEM229AB2RXF0 380 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 STAU1O95793 577 aaKnown RBP4.79□□□□□ -1.64
LINC01339-204ENST00000524094 TMCO4Q5TGY1 634 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 FOXD4L5Q5VV16 416 aaPredicted RBP4.79□□□□□ -1.64
LINC01339-204ENST00000524094 FOXR1Q6PIV2 292 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 DNAJC14Q6Y2X3 702 aaPredicted RBP4.79□□□□□ -1.64
LINC01339-204ENST00000524094 GAS2L2Q8NHY3 880 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 C1orf216Q8TAB5 229 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 FAM200AQ8TCP9 573 aa4.79□□□□□ -1.64
LINC01339-204ENST00000524094 FOXD4L4Q8WXT5 416 aaPredicted RBP4.79□□□□□ -1.64
LINC01339-204ENST00000524094 DNAAF2Q9NVR5 837 aaKnown RBP4.79□□□□□ -1.64
LINC01339-204ENST00000524094 SPINT1O43278 529 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 LILRA1O75019 489 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 LGR5O75473 907 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 HOXB4P17483 251 aaPredicted RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 IRAK1P51617 712 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 INTS6LQ5JSJ4 861 aaKnown RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 CCDC102BQ68D86 513 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 SND1Q7KZF4 910 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 KDF1Q8NAX2 398 aaPredicted RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 ZNF594Q96JF6 807 aaPredicted RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 KCTD15Q96SI1 283 aaPredicted RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 OXCT2Q9BYC2 517 aaPredicted RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 NOP53Q9NZM5 478 aaKnown RBP4.78□□□□□ -1.64
LINC01339-204ENST00000524094 NOD1Q9Y239 953 aa4.78□□□□□ -1.64
LINC01339-204ENST00000524094 ERVH48-1M5A8F1 160 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 ELNP15502 786 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 TAL1P17542 331 aaPredicted RBP4.77□□□□□ -1.65
LINC01339-204ENST00000524094 WEE1P30291 646 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 ADD1P35611 737 aaKnown RBP4.77□□□□□ -1.65
LINC01339-204ENST00000524094 SERPINB4P48594 390 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 SCNN1DP51172 638 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 GTF2IP78347 998 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 SWI5Q1ZZU3 235 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 EML3Q32P44 896 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 LARP1Q6PKG0 1096 aaKnown RBP4.77□□□□□ -1.65
LINC01339-204ENST00000524094 PRIMPOLQ96LW4 560 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 OSBPL3Q9H4L5 887 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 NSFL1CQ9UNZ2 370 aaKnown RBP4.77□□□□□ -1.65
LINC01339-204ENST00000524094 DOLKQ9UPQ8 538 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 MAP4K5Q9Y4K4 846 aa4.77□□□□□ -1.65
LINC01339-204ENST00000524094 C21orf2O43822 256 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 MX2P20592 715 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 EPHA4P54764 986 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 ERVK-9P63128 1117 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 OXLD1Q5BKU9 147 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 C1orf229Q6ZS94 237 aaPredicted RBP4.76□□□□□ -1.65
LINC01339-204ENST00000524094 SEPT12Q8IYM1 358 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01339-204ENST00000524094 ZNF837Q96EG3 531 aaPredicted RBP4.76□□□□□ -1.65
LINC01339-204ENST00000524094 TMPRSS4Q9NRS4 437 aa4.76□□□□□ -1.65
LINC01339-204ENST00000524094 CXXC1Q9P0U4 656 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms