RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 C16orf71Q8IYS4 520 aaPredicted RBP8.27□□□□□ -1.09
SHPRH-210ENST00000523276 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 AXIN2Q9Y2T1 843 aa8.27□□□□□ -1.09
SHPRH-210ENST00000523276 RNMTO43148 476 aaKnown RBP8.26□□□□□ -1.09
SHPRH-210ENST00000523276 PLEKHG5O94827 1062 aa8.26□□□□□ -1.09
SHPRH-210ENST00000523276 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
SHPRH-210ENST00000523276 MPRIPQ6WCQ1 1025 aa8.26□□□□□ -1.09
SHPRH-210ENST00000523276 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
SHPRH-210ENST00000523276 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 SMARCA5O60264 1052 aaPredicted RBP8.25□□□□□ -1.09
SHPRH-210ENST00000523276 EIF5BO60841 1220 aaKnown RBP8.25□□□□□ -1.09
SHPRH-210ENST00000523276 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
SHPRH-210ENST00000523276 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
SHPRH-210ENST00000523276 KDM3BQ7LBC6 1761 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 ERBB3P21860 1342 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 RGPD2P0DJD1 1756 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 KCNQ3O43525 872 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 SNX21Q969T3 373 aa8.25□□□□□ -1.09
SHPRH-210ENST00000523276 PHAXQ9H814 394 aaKnown RBP8.25□□□□□ -1.09
SHPRH-210ENST00000523276 APBB1O00213 710 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 FRAT2O75474 233 aaPredicted RBP8.24□□□□□ -1.09
SHPRH-210ENST00000523276 EIF2S2P20042 333 aaKnown RBP8.24□□□□□ -1.09
SHPRH-210ENST00000523276 ATP8B2P98198 1209 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 HSCBQ8IWL3 235 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 CHPF2Q9P2E5 772 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
SHPRH-210ENST00000523276 NPHP3Q7Z494 1330 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 TNS3Q68CZ2 1445 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
SHPRH-210ENST00000523276 CADPS2Q86UW7 1296 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 KIF2CQ99661 725 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 USP44Q9H0E7 712 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 OSBPL3Q9H4L5 887 aa8.24□□□□□ -1.09
SHPRH-210ENST00000523276 LRRFIP2Q9Y608 721 aaKnown RBP8.24□□□□□ -1.09
SHPRH-210ENST00000523276 ABCC6O95255 1503 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 HEG1Q9ULI3 1381 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 PNMA6EA0A0J9YXQ4 647 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 UBTFL1P0CB47 393 aaPredicted RBP8.23□□□□□ -1.09
SHPRH-210ENST00000523276 SDSP20132 328 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 DDX17Q92841 729 aaKnown RBP8.23□□□□□ -1.09
SHPRH-210ENST00000523276 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
SHPRH-210ENST00000523276 IBTKQ9P2D0 1353 aaPredicted RBP8.23□□□□□ -1.09
SHPRH-210ENST00000523276 ADAMTS7Q9UKP4 1686 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 DNAAF4Q8WXU2 420 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 EXOC6BQ9Y2D4 811 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 SALL3Q9BXA9 1300 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 PLEKHG2Q9H7P9 1386 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 GIGYF1O75420 1035 aaPredicted RBP8.22□□□□□ -1.09
SHPRH-210ENST00000523276 PDE1AP54750 535 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 BEND3Q5T5X7 828 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 RAPGEF4Q8WZA2 1011 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 SLC24A3Q9HC58 644 aa8.22□□□□□ -1.09
SHPRH-210ENST00000523276 DBF4Q9UBU7 674 aaPredicted RBP8.22□□□□□ -1.09
SHPRH-210ENST00000523276 ADCY9O60503 1353 aa8.21□□□□□ -1.09
SHPRH-210ENST00000523276 PI4KAP2A4QPH2 592 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 CASC1Q6TDU7 716 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 PI4KAP1Q8N8J0 262 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 SSH3Q8TE77 659 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 NLRP2Q9NX02 1062 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
SHPRH-210ENST00000523276 ANXA1P04083 346 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 TATP17735 454 aaPredicted RBP8.2□□□□□ -1.1
SHPRH-210ENST00000523276 HSPA2P54652 639 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.2□□□□□ -1.12e-7■■■□□ 16.8
SHPRH-210ENST00000523276 CPDO75976 1380 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 KDM6AO15550 1401 aaPredicted RBP8.2□□□□□ -1.1
SHPRH-210ENST00000523276 MEGF6O75095 1541 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 COL18A1P39060 1754 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 PHKG2P15735 406 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 MX1P20591 662 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 DDIT3P35638 169 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 ARID3AQ99856 593 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 STAP2Q9UGK3 403 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
SHPRH-210ENST00000523276 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
SHPRH-210ENST00000523276 RAB11FIP3O75154 756 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 ALDH1L1O75891 902 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 GSE1Q14687 1217 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 PROSER3Q2NL68 480 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 PPP1R42Q7Z4L9 355 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 ZNF579Q8NAF0 562 aaKnown RBP8.19□□□□□ -1.1
SHPRH-210ENST00000523276 CABLES1Q8TDN4 633 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 AOX1Q06278 1338 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 PRAMEF22A3QJZ6 481 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 STK25O00506 426 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
SHPRH-210ENST00000523276 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
SHPRH-210ENST00000523276 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 RABEP1Q15276 862 aa8.19□□□□□ -1.1
SHPRH-210ENST00000523276 KSR2Q6VAB6 950 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms