RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
CLN8-206ENST00000523237 N4BP2Q86UW6 1770 aaPredicted RBP21.57■■□□□ 1.04
CLN8-206ENST00000523237 HTATSF1O43719 755 aaKnown RBP21.57■■□□□ 1.04
CLN8-206ENST00000523237 MCM10Q7L590 875 aa21.57■■□□□ 1.04
CLN8-206ENST00000523237 FMNL2Q96PY5 1086 aa21.57■■□□□ 1.04
CLN8-206ENST00000523237 KIAA1551Q9HCM1 1747 aa21.57■■□□□ 1.04
CLN8-206ENST00000523237 FKBP8Q14318 412 aa21.56■■□□□ 1.04
CLN8-206ENST00000523237 ZNF784Q8NCA9 323 aaPredicted RBP21.56■■□□□ 1.04
CLN8-206ENST00000523237 CANXP27824 592 aaKnown RBP21.55■■□□□ 1.04
CLN8-206ENST00000523237 TGFB2P61812 414 aa21.55■■□□□ 1.04
CLN8-206ENST00000523237 USPL1Q5W0Q7 1092 aa21.55■■□□□ 1.04
CLN8-206ENST00000523237 PNNQ9H307 717 aaKnown RBP21.55■■□□□ 1.04
CLN8-206ENST00000523237 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
CLN8-206ENST00000523237 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
CLN8-206ENST00000523237 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
CLN8-206ENST00000523237 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
CLN8-206ENST00000523237 KCNQ3O43525 872 aa21.52■■□□□ 1.04
CLN8-206ENST00000523237 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
CLN8-206ENST00000523237 A0A087WZG4 1122 aa21.51■■□□□ 1.03
CLN8-206ENST00000523237 TM4SF1P30408 202 aa21.51■■□□□ 1.03
CLN8-206ENST00000523237 EIF5P55010 431 aaKnown RBP21.51■■□□□ 1.03
CLN8-206ENST00000523237 DDR1Q08345 913 aa21.51■■□□□ 1.03
CLN8-206ENST00000523237 MAPK8IP3Q9UPT6 1336 aa21.51■■□□□ 1.03
CLN8-206ENST00000523237 BRCA1P38398 1863 aaKnown RBP21.5■■□□□ 1.03
CLN8-206ENST00000523237 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
CLN8-206ENST00000523237 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
CLN8-206ENST00000523237 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
CLN8-206ENST00000523237 AFDNP55196 1824 aaKnown RBP21.49■■□□□ 1.03
CLN8-206ENST00000523237 SCN7AQ01118 1682 aa21.48■■□□□ 1.03
CLN8-206ENST00000523237 IL6STP40189 918 aaPredicted RBP21.48■■□□□ 1.03
CLN8-206ENST00000523237 TAF7Q15545 349 aaPredicted RBP21.48■■□□□ 1.03
CLN8-206ENST00000523237 NFE2L2Q16236 605 aa21.48■■□□□ 1.03
CLN8-206ENST00000523237 NPM2Q86SE8 214 aaKnown RBP21.48■■□□□ 1.03
CLN8-206ENST00000523237 ZNF330Q9Y3S2 320 aaPredicted RBP21.48■■□□□ 1.03
CLN8-206ENST00000523237 NRXN2Q9P2S2 1712 aa21.47■■□□□ 1.03
CLN8-206ENST00000523237 DPEP1P16444 411 aa21.47■■□□□ 1.03
CLN8-206ENST00000523237 NFIXQ14938 502 aa21.47■■□□□ 1.03
CLN8-206ENST00000523237 BCL2L12Q9HB09 334 aa21.47■■□□□ 1.03
CLN8-206ENST00000523237 A1BGP04217 495 aa21.46■■□□□ 1.03
CLN8-206ENST00000523237 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
CLN8-206ENST00000523237 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
CLN8-206ENST00000523237 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
CLN8-206ENST00000523237 BCS1LQ9Y276 419 aa21.45■■□□□ 1.02
CLN8-206ENST00000523237 KDM3BQ7LBC6 1761 aa21.45■■□□□ 1.02
CLN8-206ENST00000523237 ARFGEF1Q9Y6D6 1849 aa21.44■■□□□ 1.02
CLN8-206ENST00000523237 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
CLN8-206ENST00000523237 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
CLN8-206ENST00000523237 ZEB1P37275 1124 aaPredicted RBP21.43■■□□□ 1.02
CLN8-206ENST00000523237 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
CLN8-206ENST00000523237 BCORQ6W2J9 1755 aa21.43■■□□□ 1.02
CLN8-206ENST00000523237 SERPINB2P05120 415 aa21.42■■□□□ 1.02
CLN8-206ENST00000523237 KCNA3P22001 575 aa21.42■■□□□ 1.02
CLN8-206ENST00000523237 MIS18AQ9NYP9 233 aa21.42■■□□□ 1.02
CLN8-206ENST00000523237 PIM2Q9P1W9 311 aa21.42■■□□□ 1.02
CLN8-206ENST00000523237 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
CLN8-206ENST00000523237 DZIP3Q86Y13 1208 aaKnown RBP21.4■■□□□ 1.02
CLN8-206ENST00000523237 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
CLN8-206ENST00000523237 TBC1D9BQ66K14 1250 aa21.39■■□□□ 1.01
CLN8-206ENST00000523237 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 DLEC1Q9Y238 1755 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 ADCY9O60503 1353 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 CHRNA5P30532 468 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 PIP4K2AP48426 406 aaPredicted RBP21.38■■□□□ 1.01
CLN8-206ENST00000523237 RIPK4P57078 832 aa21.38■■□□□ 1.01
CLN8-206ENST00000523237 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
CLN8-206ENST00000523237 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
CLN8-206ENST00000523237 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
CLN8-206ENST00000523237 LMOD3Q0VAK6 560 aa21.37■■□□□ 1.01
CLN8-206ENST00000523237 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
CLN8-206ENST00000523237 ARHGAP27Q6ZUM4 889 aa21.37■■□□□ 1.01
CLN8-206ENST00000523237 TMPOP42166 694 aaKnown RBP21.36■■□□□ 1.01
CLN8-206ENST00000523237 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
CLN8-206ENST00000523237 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
CLN8-206ENST00000523237 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
CLN8-206ENST00000523237 ANKRD31Q8N7Z5 1873 aa21.35■■□□□ 1.01
CLN8-206ENST00000523237 NBPF26B4DH59 902 aa21.34■■□□□ 1.01
CLN8-206ENST00000523237 NBPF10Q6P3W6 841 aaKnown RBP21.34■■□□□ 1.01
CLN8-206ENST00000523237 CLEC4GQ6UXB4 293 aa21.34■■□□□ 1.01
CLN8-206ENST00000523237 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
CLN8-206ENST00000523237 NBPF15Q8N660 670 aa21.34■■□□□ 1.01
CLN8-206ENST00000523237 ZNF652Q9Y2D9 606 aa21.34■■□□□ 1.01
CLN8-206ENST00000523237 RUNDC1Q96C34 613 aa21.33■■□□□ 1.01
CLN8-206ENST00000523237 TSPYL4Q9UJ04 414 aa21.33■■□□□ 1.01
CLN8-206ENST00000523237 NPHP1O15259 732 aa21.32■■□□□ 1
CLN8-206ENST00000523237 GPBP1L1Q9HC44 474 aaPredicted RBP21.32■■□□□ 1
CLN8-206ENST00000523237 H0YIN7 160 aa21.31■■□□□ 1
CLN8-206ENST00000523237 RGL2O15211 777 aa21.31■■□□□ 1
CLN8-206ENST00000523237 PRR5LQ6MZQ0 368 aa21.31■■□□□ 1
CLN8-206ENST00000523237 C2CD5Q86YS7 1000 aa21.31■■□□□ 1
CLN8-206ENST00000523237 CNBD1Q8NA66 436 aa21.31■■□□□ 1
CLN8-206ENST00000523237 BRIP1Q9BX63 1249 aa21.31■■□□□ 1
CLN8-206ENST00000523237 BABAM1Q9NWV8 329 aa21.31■■□□□ 1
CLN8-206ENST00000523237 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
CLN8-206ENST00000523237 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
CLN8-206ENST00000523237 PDE6BP35913 854 aa21.3■■□□□ 1
CLN8-206ENST00000523237 C1QTNF8P60827 252 aa21.3■■□□□ 1
CLN8-206ENST00000523237 NEUROD2Q15784 382 aa21.3■■□□□ 1
CLN8-206ENST00000523237 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
CLN8-206ENST00000523237 ST5P78524 1137 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms