RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 TNRQ92752 1358 aa12.88□□□□□ -0.35
ERGIC1-211ENST00000523215 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
ERGIC1-211ENST00000523215 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 MCCP23508 829 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
ERGIC1-211ENST00000523215 ANKRD36CQ5JPF3 1778 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 FLT4P35916 1363 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 POLA2Q14181 598 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 UTYO14607 1347 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 MLECQ14165 292 aa12.86□□□□□ -0.35
ERGIC1-211ENST00000523215 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
ERGIC1-211ENST00000523215 LTKP29376 864 aa12.85□□□□□ -0.35
ERGIC1-211ENST00000523215 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERGIC1-211ENST00000523215 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
ERGIC1-211ENST00000523215 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
ERGIC1-211ENST00000523215 MTX1Q13505 466 aa12.84□□□□□ -0.35
ERGIC1-211ENST00000523215 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
ERGIC1-211ENST00000523215 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
ERGIC1-211ENST00000523215 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
ERGIC1-211ENST00000523215 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.35
ERGIC1-211ENST00000523215 HOXB7P09629 217 aa12.83□□□□□ -0.35
ERGIC1-211ENST00000523215 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.35
ERGIC1-211ENST00000523215 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.35
ERGIC1-211ENST00000523215 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-211ENST00000523215 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
ERGIC1-211ENST00000523215 TCHHQ07283 1943 aa12.83□□□□□ -0.36
ERGIC1-211ENST00000523215 BRD1O95696 1058 aa12.83□□□□□ -0.36
ERGIC1-211ENST00000523215 MYH7P12883 1935 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 DCTN1Q14203 1278 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 CCDC171Q6TFL3 1326 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 OFD1O75665 1012 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
ERGIC1-211ENST00000523215 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 HSCBQ8IWL3 235 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 TPM2P07951 284 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 MCM2P49736 904 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 NUCB2P80303 420 aa12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
ERGIC1-211ENST00000523215 ACEP12821 1306 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 TTC14Q96N46 770 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 GBP4Q96PP9 640 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 PANK2Q9BZ23 570 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 LRP6O75581 1613 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 COG3Q96JB2 828 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
ERGIC1-211ENST00000523215 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
ERGIC1-211ENST00000523215 ESPNB1AK53 854 aa12.79□□□□□ -0.36
ERGIC1-211ENST00000523215 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-211ENST00000523215 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
ERGIC1-211ENST00000523215 TOGARAM1Q9Y4F4 1720 aa12.77□□□□□ -0.36
ERGIC1-211ENST00000523215 MAFGO15525 162 aa12.77□□□□□ -0.36
ERGIC1-211ENST00000523215 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.36
ERGIC1-211ENST00000523215 FAM193AP78312 1265 aa12.77□□□□□ -0.36
ERGIC1-211ENST00000523215 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
ERGIC1-211ENST00000523215 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
ERGIC1-211ENST00000523215 BCORQ6W2J9 1755 aa12.77□□□□□ -0.37
ERGIC1-211ENST00000523215 RBM43Q6ZSC3 357 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 KCND1Q9NSA2 647 aa12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 SPTLC3Q9NUV7 552 aa12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 ZBTB22O15209 634 aa12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 SDSP20132 328 aa12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
ERGIC1-211ENST00000523215 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
ERGIC1-211ENST00000523215 PSEN1P49768 467 aa12.75□□□□□ -0.37
ERGIC1-211ENST00000523215 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
ERGIC1-211ENST00000523215 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 MCM10Q7L590 875 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 HSPA4P34932 840 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
ERGIC1-211ENST00000523215 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 FOXO3O43524 673 aa12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 PDE1AP54750 535 aa12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
ERGIC1-211ENST00000523215 SETD1BQ9UPS6 1966 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-211ENST00000523215 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 FAM177A1Q8N128 213 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 SSFA2P28290 1259 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms