RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 KIF3CO14782 793 aa20.84■□□□□ 0.93
MRPS28-209ENST00000522987 POLRMTO00411 1230 aaKnown RBP20.83■□□□□ 0.93
MRPS28-209ENST00000522987 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
MRPS28-209ENST00000522987 COL15A1P39059 1388 aa20.83■□□□□ 0.92
MRPS28-209ENST00000522987 PIM2Q9P1W9 311 aa20.82■□□□□ 0.92
MRPS28-209ENST00000522987 CEP350Q5VT06 3117 aa20.81■□□□□ 0.92
MRPS28-209ENST00000522987 TM4SF1P30408 202 aa20.81■□□□□ 0.92
MRPS28-209ENST00000522987 C9orf131Q5VYM1 1079 aa20.81■□□□□ 0.92
MRPS28-209ENST00000522987 NMRK2Q9NPI5 230 aa20.81■□□□□ 0.92
MRPS28-209ENST00000522987 HSPA6P17066 643 aa20.8■□□□□ 0.92
MRPS28-209ENST00000522987 NFIXQ14938 502 aa20.8■□□□□ 0.92
MRPS28-209ENST00000522987 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
MRPS28-209ENST00000522987 BICDL1Q6ZP65 573 aa20.8■□□□□ 0.92
MRPS28-209ENST00000522987 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
MRPS28-209ENST00000522987 CACNA1SQ13698 1873 aa20.79■□□□□ 0.92
MRPS28-209ENST00000522987 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
MRPS28-209ENST00000522987 TTC5Q8N0Z6 440 aa20.79■□□□□ 0.92
MRPS28-209ENST00000522987 DLEC1Q9Y238 1755 aa20.79■□□□□ 0.92
MRPS28-209ENST00000522987 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
MRPS28-209ENST00000522987 BCL2L12Q9HB09 334 aa20.78■□□□□ 0.92
MRPS28-209ENST00000522987 NARFQ9UHQ1 456 aa20.78■□□□□ 0.92
MRPS28-209ENST00000522987 ANKRD31Q8N7Z5 1873 aa20.77■□□□□ 0.92
MRPS28-209ENST00000522987 TEFQ10587 303 aa20.77■□□□□ 0.92
MRPS28-209ENST00000522987 GNAT3A8MTJ3 354 aa20.76■□□□□ 0.91
MRPS28-209ENST00000522987 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
MRPS28-209ENST00000522987 RNF181Q9P0P0 153 aa20.76■□□□□ 0.91
MRPS28-209ENST00000522987 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
MRPS28-209ENST00000522987 SCN7AQ01118 1682 aa20.75■□□□□ 0.91
MRPS28-209ENST00000522987 SERPINB2P05120 415 aa20.75■□□□□ 0.91
MRPS28-209ENST00000522987 RASSF7Q02833 373 aa20.75■□□□□ 0.91
MRPS28-209ENST00000522987 CCDC24Q8N4L8 307 aa20.75■□□□□ 0.91
MRPS28-209ENST00000522987 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
MRPS28-209ENST00000522987 GAS2L2Q8NHY3 880 aa20.74■□□□□ 0.91
MRPS28-209ENST00000522987 PHACTR3Q96KR7 559 aa20.74■□□□□ 0.91
MRPS28-209ENST00000522987 NPC1L1Q9UHC9 1359 aa20.73■□□□□ 0.91
MRPS28-209ENST00000522987 KCNQ3O43525 872 aa20.73■□□□□ 0.91
MRPS28-209ENST00000522987 VSIG10Q8N0Z9 540 aa20.73■□□□□ 0.91
MRPS28-209ENST00000522987 TBC1D2BQ9UPU7 963 aa20.73■□□□□ 0.91
MRPS28-209ENST00000522987 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
MRPS28-209ENST00000522987 STARD3NLO95772 234 aa20.72■□□□□ 0.91
MRPS28-209ENST00000522987 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
MRPS28-209ENST00000522987 COL11A2P13942 1736 aaPredicted RBP20.72■□□□□ 0.91
MRPS28-209ENST00000522987 TIAM2Q8IVF5 1701 aa20.71■□□□□ 0.91
MRPS28-209ENST00000522987 PIP4K2AP48426 406 aaPredicted RBP20.71■□□□□ 0.91
MRPS28-209ENST00000522987 TBC1D9BQ66K14 1250 aa20.71■□□□□ 0.91
MRPS28-209ENST00000522987 A1BGP04217 495 aa20.7■□□□□ 0.9
MRPS28-209ENST00000522987 EIF5P55010 431 aaKnown RBP20.7■□□□□ 0.9
MRPS28-209ENST00000522987 C2CD5Q86YS7 1000 aa20.7■□□□□ 0.9
MRPS28-209ENST00000522987 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
MRPS28-209ENST00000522987 RSPH6AQ9H0K4 717 aa20.7■□□□□ 0.9
MRPS28-209ENST00000522987 ZNF219Q9P2Y4 722 aaPredicted RBP20.7■□□□□ 0.9
MRPS28-209ENST00000522987 TNRC6CQ9HCJ0 1690 aaKnown RBP20.7■□□□□ 0.9
MRPS28-209ENST00000522987 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
MRPS28-209ENST00000522987 TOMM70O94826 608 aa20.69■□□□□ 0.9
MRPS28-209ENST00000522987 WDR90Q96KV7 1748 aa20.69■□□□□ 0.9
MRPS28-209ENST00000522987 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
MRPS28-209ENST00000522987 C16orf71Q8IYS4 520 aaPredicted RBP20.68■□□□□ 0.9
MRPS28-209ENST00000522987 RRAGCQ9HB90 399 aa20.68■□□□□ 0.9
MRPS28-209ENST00000522987 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
MRPS28-209ENST00000522987 BTBD11A6QL63 1104 aa20.67■□□□□ 0.9
MRPS28-209ENST00000522987 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
MRPS28-209ENST00000522987 HTRA3P83110 453 aa20.67■□□□□ 0.9
MRPS28-209ENST00000522987 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
MRPS28-209ENST00000522987 MCM10Q7L590 875 aa20.67■□□□□ 0.9
MRPS28-209ENST00000522987 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
MRPS28-209ENST00000522987 A0A087WZG4 1122 aa20.66■□□□□ 0.9
MRPS28-209ENST00000522987 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
MRPS28-209ENST00000522987 PRELPP51888 382 aa20.66■□□□□ 0.9
MRPS28-209ENST00000522987 DCTN1Q14203 1278 aa20.66■□□□□ 0.9
MRPS28-209ENST00000522987 CEMIPQ8WUJ3 1361 aa20.65■□□□□ 0.9
MRPS28-209ENST00000522987 H0YIN7 160 aa20.65■□□□□ 0.9
MRPS28-209ENST00000522987 TTLL6Q8N841 843 aa20.65■□□□□ 0.9
MRPS28-209ENST00000522987 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.9
MRPS28-209ENST00000522987 SLX4Q8IY92 1834 aa20.64■□□□□ 0.9
MRPS28-209ENST00000522987 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
MRPS28-209ENST00000522987 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
MRPS28-209ENST00000522987 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
MRPS28-209ENST00000522987 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
MRPS28-209ENST00000522987 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
MRPS28-209ENST00000522987 NPHP1O15259 732 aa20.63■□□□□ 0.89
MRPS28-209ENST00000522987 APLP1P51693 650 aa20.63■□□□□ 0.89
MRPS28-209ENST00000522987 PRR5LQ6MZQ0 368 aa20.63■□□□□ 0.89
MRPS28-209ENST00000522987 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
MRPS28-209ENST00000522987 TEX13AQ9BXU3 409 aaPredicted RBP20.63■□□□□ 0.89
MRPS28-209ENST00000522987 IL6STP40189 918 aaPredicted RBP20.62■□□□□ 0.89
MRPS28-209ENST00000522987 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
MRPS28-209ENST00000522987 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
MRPS28-209ENST00000522987 RBM46Q8TBY0 533 aaKnown RBP20.61■□□□□ 0.89
MRPS28-209ENST00000522987 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
MRPS28-209ENST00000522987 NFKBIEO00221 500 aa20.6■□□□□ 0.89
MRPS28-209ENST00000522987 C21orf2O43822 256 aa20.6■□□□□ 0.89
MRPS28-209ENST00000522987 LMNB1P20700 586 aa20.6■□□□□ 0.89
MRPS28-209ENST00000522987 SETDB2Q96T68 719 aa20.59■□□□□ 0.89
MRPS28-209ENST00000522987 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
MRPS28-209ENST00000522987 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
MRPS28-209ENST00000522987 ARFGEF2Q9Y6D5 1785 aa20.58■□□□□ 0.89
MRPS28-209ENST00000522987 LAMB4A4D0S4 1761 aa20.57■□□□□ 0.88
MRPS28-209ENST00000522987 FAM177BA6PVY3 158 aa20.57■□□□□ 0.88
MRPS28-209ENST00000522987 PDE6BP35913 854 aa20.57■□□□□ 0.88
MRPS28-209ENST00000522987 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms