RNA–Protein interactions for RNA: ENST00000522978.1

UBXN2B-204, Transcript of UBX domain protein 2B, humanhuman

TSL 3

Gene UBXN2B, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-204ENST00000522978 PLEKHF1Q96S99 279 aa23.58■■□□□ 1.37
UBXN2B-204ENST00000522978 GNAT3A8MTJ3 354 aa23.57■■□□□ 1.36
UBXN2B-204ENST00000522978 PNNQ9H307 717 aaKnown RBP23.57■■□□□ 1.36
UBXN2B-204ENST00000522978 TJP1Q07157 1748 aa23.56■■□□□ 1.36
UBXN2B-204ENST00000522978 CEMIPQ8WUJ3 1361 aa23.56■■□□□ 1.36
UBXN2B-204ENST00000522978 ANP32CO43423 234 aa23.56■■□□□ 1.36
UBXN2B-204ENST00000522978 SLC52A2Q9HAB3 445 aa23.56■■□□□ 1.36
UBXN2B-204ENST00000522978 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
UBXN2B-204ENST00000522978 FKBP8Q14318 412 aa23.55■■□□□ 1.36
UBXN2B-204ENST00000522978 NEFMP07197 916 aa23.54■■□□□ 1.36
UBXN2B-204ENST00000522978 KCNA3P22001 575 aa23.54■■□□□ 1.36
UBXN2B-204ENST00000522978 NMRK2Q9NPI5 230 aa23.54■■□□□ 1.36
UBXN2B-204ENST00000522978 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
UBXN2B-204ENST00000522978 DDR1Q08345 913 aa23.53■■□□□ 1.36
UBXN2B-204ENST00000522978 WDR43Q15061 677 aaKnown RBP eCLIP23.53■■□□□ 1.36
UBXN2B-204ENST00000522978 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
UBXN2B-204ENST00000522978 KCPQ6ZWJ8 1503 aa23.51■■□□□ 1.35
UBXN2B-204ENST00000522978 C9orf131Q5VYM1 1079 aa23.51■■□□□ 1.35
UBXN2B-204ENST00000522978 IL17REQ8NFR9 667 aa23.51■■□□□ 1.35
UBXN2B-204ENST00000522978 USP42Q9H9J4 1324 aaKnown RBP23.51■■□□□ 1.35
UBXN2B-204ENST00000522978 CHRNA5P30532 468 aa23.5■■□□□ 1.35
UBXN2B-204ENST00000522978 INTS5Q6P9B9 1019 aaKnown RBP23.5■■□□□ 1.35
UBXN2B-204ENST00000522978 PIM2Q9P1W9 311 aa23.5■■□□□ 1.35
UBXN2B-204ENST00000522978 HTATSF1O43719 755 aaKnown RBP23.49■■□□□ 1.35
UBXN2B-204ENST00000522978 TOMM70O94826 608 aa23.49■■□□□ 1.35
UBXN2B-204ENST00000522978 DNAJC10Q8IXB1 793 aa23.49■■□□□ 1.35
UBXN2B-204ENST00000522978 NFE2L2Q16236 605 aa23.48■■□□□ 1.35
UBXN2B-204ENST00000522978 DALRD3Q5D0E6 543 aaKnown RBP23.48■■□□□ 1.35
UBXN2B-204ENST00000522978 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
UBXN2B-204ENST00000522978 APLP1P51693 650 aa23.47■■□□□ 1.35
UBXN2B-204ENST00000522978 TEFQ10587 303 aa23.47■■□□□ 1.35
UBXN2B-204ENST00000522978 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
UBXN2B-204ENST00000522978 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
UBXN2B-204ENST00000522978 USPL1Q5W0Q7 1092 aa23.46■■□□□ 1.35
UBXN2B-204ENST00000522978 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
UBXN2B-204ENST00000522978 SBF1O95248 1867 aa23.45■■□□□ 1.35
UBXN2B-204ENST00000522978 POLRMTO00411 1230 aaKnown RBP23.45■■□□□ 1.34
UBXN2B-204ENST00000522978 ZPR1O75312 459 aa23.45■■□□□ 1.34
UBXN2B-204ENST00000522978 CCDC184Q52MB2 194 aa23.45■■□□□ 1.34
UBXN2B-204ENST00000522978 RNF181Q9P0P0 153 aa23.45■■□□□ 1.34
UBXN2B-204ENST00000522978 AFDNP55196 1824 aaKnown RBP23.45■■□□□ 1.34
UBXN2B-204ENST00000522978 RUNDC1Q96C34 613 aa23.44■■□□□ 1.34
UBXN2B-204ENST00000522978 TM4SF1P30408 202 aa23.43■■□□□ 1.34
UBXN2B-204ENST00000522978 MCM10Q7L590 875 aa23.43■■□□□ 1.34
UBXN2B-204ENST00000522978 CCDC146Q8IYE0 955 aa23.42■■□□□ 1.34
UBXN2B-204ENST00000522978 C16orf71Q8IYS4 520 aaPredicted RBP23.42■■□□□ 1.34
UBXN2B-204ENST00000522978 SOS1Q07889 1333 aaPredicted RBP23.41■■□□□ 1.34
UBXN2B-204ENST00000522978 CYP19A1P11511 503 aaPredicted RBP23.41■■□□□ 1.34
UBXN2B-204ENST00000522978 HTRA3P83110 453 aa23.41■■□□□ 1.34
UBXN2B-204ENST00000522978 DNAJC5GQ8N7S2 189 aa23.41■■□□□ 1.34
UBXN2B-204ENST00000522978 MRS2Q9HD23 443 aa23.41■■□□□ 1.34
UBXN2B-204ENST00000522978 WDR90Q96KV7 1748 aa23.4■■□□□ 1.34
UBXN2B-204ENST00000522978 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
UBXN2B-204ENST00000522978 DCTN1Q14203 1278 aa23.4■■□□□ 1.34
UBXN2B-204ENST00000522978 ZNF790Q6PG37 636 aa23.39■■□□□ 1.33
UBXN2B-204ENST00000522978 RBM46Q8TBY0 533 aaKnown RBP23.39■■□□□ 1.33
UBXN2B-204ENST00000522978 RRAGCQ9HB90 399 aa23.39■■□□□ 1.33
UBXN2B-204ENST00000522978 ZBTB1Q9Y2K1 713 aa23.39■■□□□ 1.33
UBXN2B-204ENST00000522978 LAMB4A4D0S4 1761 aa23.39■■□□□ 1.33
UBXN2B-204ENST00000522978 RASSF7Q02833 373 aa23.38■■□□□ 1.33
UBXN2B-204ENST00000522978 NFIXQ14938 502 aa23.38■■□□□ 1.33
UBXN2B-204ENST00000522978 TTC5Q8N0Z6 440 aa23.38■■□□□ 1.33
UBXN2B-204ENST00000522978 COL15A1P39059 1388 aa23.38■■□□□ 1.33
UBXN2B-204ENST00000522978 CCDC88AQ3V6T2 1871 aa23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 RIPK4P57078 832 aa23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 VSIG10Q8N0Z9 540 aa23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 PNISRQ8TF01 805 aaKnown RBP23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 NARFQ9UHQ1 456 aa23.37■■□□□ 1.33
UBXN2B-204ENST00000522978 KDM2BQ8NHM5 1336 aa23.36■■□□□ 1.33
UBXN2B-204ENST00000522978 BTBD11A6QL63 1104 aa23.36■■□□□ 1.33
UBXN2B-204ENST00000522978 BCL2L12Q9HB09 334 aa23.36■■□□□ 1.33
UBXN2B-204ENST00000522978 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
UBXN2B-204ENST00000522978 HEG1Q9ULI3 1381 aa23.35■■□□□ 1.33
UBXN2B-204ENST00000522978 TAF7Q15545 349 aaPredicted RBP23.34■■□□□ 1.33
UBXN2B-204ENST00000522978 BICDL1Q6ZP65 573 aa23.34■■□□□ 1.33
UBXN2B-204ENST00000522978 NRXN2Q9P2S2 1712 aa23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 TNRC6CQ9HCJ0 1690 aaKnown RBP23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 SERPINB2P05120 415 aa23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 THUMPD2Q9BTF0 503 aaKnown RBP23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 PCNTO95613 3336 aa23.33■■□□□ 1.33
UBXN2B-204ENST00000522978 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
UBXN2B-204ENST00000522978 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
UBXN2B-204ENST00000522978 CARMIL3Q8ND23 1372 aa23.31■■□□□ 1.32
UBXN2B-204ENST00000522978 PRELPP51888 382 aa23.31■■□□□ 1.32
UBXN2B-204ENST00000522978 C2CD5Q86YS7 1000 aa23.31■■□□□ 1.32
UBXN2B-204ENST00000522978 FMNL2Q96PY5 1086 aa23.31■■□□□ 1.32
UBXN2B-204ENST00000522978 FSTL1Q12841 308 aa23.3■■□□□ 1.32
UBXN2B-204ENST00000522978 TRIM35Q9UPQ4 493 aa23.3■■□□□ 1.32
UBXN2B-204ENST00000522978 APAF1O14727 1248 aa23.29■■□□□ 1.32
UBXN2B-204ENST00000522978 KCNQ3O43525 872 aa23.29■■□□□ 1.32
UBXN2B-204ENST00000522978 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
UBXN2B-204ENST00000522978 ZNF330Q9Y3S2 320 aaPredicted RBP23.29■■□□□ 1.32
UBXN2B-204ENST00000522978 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
UBXN2B-204ENST00000522978 TTLL6Q8N841 843 aa23.28■■□□□ 1.32
UBXN2B-204ENST00000522978 LMNB1P20700 586 aa23.27■■□□□ 1.32
UBXN2B-204ENST00000522978 KLRG1Q96E93 195 aa23.27■■□□□ 1.32
UBXN2B-204ENST00000522978 ZNF219Q9P2Y4 722 aaPredicted RBP23.27■■□□□ 1.32
UBXN2B-204ENST00000522978 ANKRD31Q8N7Z5 1873 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms