RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
PABPC1-219ENST00000522387 C5P01031 1676 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 AIMP1Q12904 312 aaKnown RBP15.85■□□□□ 0.13
PABPC1-219ENST00000522387 DEFB132Q7Z7B7 95 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
PABPC1-219ENST00000522387 TNNQ9UQP3 1299 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
PABPC1-219ENST00000522387 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
PABPC1-219ENST00000522387 G2E3Q7L622 706 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
PABPC1-219ENST00000522387 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
PABPC1-219ENST00000522387 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-219ENST00000522387 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
PABPC1-219ENST00000522387 UTRNP46939 3433 aa15.84■□□□□ 0.13
PABPC1-219ENST00000522387 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
PABPC1-219ENST00000522387 NOB1Q9ULX3 412 aaKnown RBP15.83■□□□□ 0.12
PABPC1-219ENST00000522387 PAPPAQ13219 1627 aa15.83■□□□□ 0.12
PABPC1-219ENST00000522387 UBR2Q8IWV8 1755 aa15.83■□□□□ 0.12
PABPC1-219ENST00000522387 PROM2Q8N271 834 aa15.83■□□□□ 0.12
PABPC1-219ENST00000522387 LINC00116Q8NCU8 138 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 STARD3NLO95772 234 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
PABPC1-219ENST00000522387 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 NBPF14Q5TI25 921 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
PABPC1-219ENST00000522387 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
PABPC1-219ENST00000522387 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
PABPC1-219ENST00000522387 SF3B2Q13435 895 aaKnown RBP15.81■□□□□ 0.12
PABPC1-219ENST00000522387 PDIA6Q15084 440 aa15.81■□□□□ 0.12
PABPC1-219ENST00000522387 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
PABPC1-219ENST00000522387 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
PABPC1-219ENST00000522387 MRPL50Q8N5N7 158 aaKnown RBP15.81■□□□□ 0.12
PABPC1-219ENST00000522387 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-219ENST00000522387 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-219ENST00000522387 F6X3S4 739 aa15.8■□□□□ 0.12
PABPC1-219ENST00000522387 FKBP5Q13451 457 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-219ENST00000522387 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
PABPC1-219ENST00000522387 HOXB7P09629 217 aa15.79■□□□□ 0.12
PABPC1-219ENST00000522387 ALDH1L2Q3SY69 923 aa15.79■□□□□ 0.12
PABPC1-219ENST00000522387 PHF14O94880 888 aa15.79■□□□□ 0.12
PABPC1-219ENST00000522387 RRP1P56182 461 aaKnown RBP15.79■□□□□ 0.12
PABPC1-219ENST00000522387 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
PABPC1-219ENST00000522387 FLIIQ13045 1269 aa15.78■□□□□ 0.12
PABPC1-219ENST00000522387 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
PABPC1-219ENST00000522387 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
PABPC1-219ENST00000522387 PANK1Q8TE04 598 aa15.78■□□□□ 0.12
PABPC1-219ENST00000522387 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.12
PABPC1-219ENST00000522387 XAGE3Q8WTP9 111 aa15.77■□□□□ 0.12
PABPC1-219ENST00000522387 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-219ENST00000522387 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.12
PABPC1-219ENST00000522387 GNPATO15228 680 aa15.77■□□□□ 0.11
PABPC1-219ENST00000522387 TRIM27P14373 513 aa15.77■□□□□ 0.11
PABPC1-219ENST00000522387 TTLL7Q6ZT98 887 aa15.77■□□□□ 0.11
PABPC1-219ENST00000522387 TBC1D2BQ9UPU7 963 aa15.77■□□□□ 0.11
PABPC1-219ENST00000522387 MYH14Q7Z406 1995 aaKnown RBP15.76■□□□□ 0.11
PABPC1-219ENST00000522387 RLBP1P12271 317 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 PLSCR1O15162 318 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 TJP1Q07157 1748 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
PABPC1-219ENST00000522387 ZBTB3Q9H5J0 574 aa15.76■□□□□ 0.11
PABPC1-219ENST00000522387 PI4KAP2A4QPH2 592 aa15.75■□□□□ 0.11
PABPC1-219ENST00000522387 PI4KAP1Q8N8J0 262 aa15.75■□□□□ 0.11
PABPC1-219ENST00000522387 BAG6P46379 1132 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 ATF7IPQ6VMQ6 1270 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
PABPC1-219ENST00000522387 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
PABPC1-219ENST00000522387 LRP10Q7Z4F1 713 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 AK7Q96M32 723 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
PABPC1-219ENST00000522387 LY75O60449 1722 aa15.73■□□□□ 0.11
PABPC1-219ENST00000522387 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
PABPC1-219ENST00000522387 CAMKK2Q96RR4 588 aa15.73■□□□□ 0.11
PABPC1-219ENST00000522387 COG6Q9Y2V7 657 aa15.73■□□□□ 0.11
PABPC1-219ENST00000522387 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
PABPC1-219ENST00000522387 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.73■□□□□ 0.11
PABPC1-219ENST00000522387 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
PABPC1-219ENST00000522387 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 LAMB4A4D0S4 1761 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 MSH5O43196 834 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 ZNF827Q17R98 1081 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 TFCP2L1Q9NZI6 479 aa15.72■□□□□ 0.11
PABPC1-219ENST00000522387 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
PABPC1-219ENST00000522387 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
PABPC1-219ENST00000522387 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
PABPC1-219ENST00000522387 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.1
PABPC1-219ENST00000522387 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.1
PABPC1-219ENST00000522387 ITPRIPQ8IWB1 547 aa15.71■□□□□ 0.1
PABPC1-219ENST00000522387 TMEM57Q8N5G2 664 aa15.71■□□□□ 0.1
PABPC1-219ENST00000522387 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.1
PABPC1-219ENST00000522387 RTCBQ9Y3I0 505 aaKnown RBP15.71■□□□□ 0.1
PABPC1-219ENST00000522387 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms