RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
SH2D4A-205ENST00000522328 HSP90AB1P08238 724 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-205ENST00000522328 MFSD10Q14728 455 aa9.39□□□□□ -0.91
SH2D4A-205ENST00000522328 MAP2P11137 1827 aaKnown RBP9.39□□□□□ -0.91
SH2D4A-205ENST00000522328 IGSF1Q8N6C5 1336 aa9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 ERVV-2B6SEH9 535 aa9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 PHF14O94880 888 aa9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
SH2D4A-205ENST00000522328 ZNF831Q5JPB2 1677 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 GNPATO15228 680 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 PDE4AP27815 886 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 KDRP35968 1356 aa9.37□□□□□ -0.91
SH2D4A-205ENST00000522328 ITPK1Q13572 414 aa9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 PLEKHO1Q53GL0 409 aaPredicted RBP9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 AMIGO3Q86WK7 504 aa9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 POLR3GLQ9BT43 218 aa9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 ADCY9O60503 1353 aa9.36□□□□□ -0.91
SH2D4A-205ENST00000522328 TNNT2P45379 298 aaPredicted RBP9.35□□□□□ -0.91
SH2D4A-205ENST00000522328 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
SH2D4A-205ENST00000522328 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
SH2D4A-205ENST00000522328 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
SH2D4A-205ENST00000522328 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 MMP10P09238 476 aa9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 TIE1P35590 1138 aa9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 PANK3Q9H999 370 aa9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 CICQ96RK0 1608 aaPredicted RBP9.34□□□□□ -0.91
SH2D4A-205ENST00000522328 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 SEMA3EO15041 775 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 CABP4P57796 275 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 TGFB2P61812 414 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
SH2D4A-205ENST00000522328 KDM6AO15550 1401 aaPredicted RBP9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 C10orf71Q711Q0 1435 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 TTLL13PA6NNM8 815 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 RPS6KA4O75676 772 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 RFC4P35249 363 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 MTHFSP49914 203 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 SMIM5Q71RC9 77 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
SH2D4A-205ENST00000522328 COL5A3P25940 1745 aaPredicted RBP9.31□□□□□ -0.92
SH2D4A-205ENST00000522328 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
SH2D4A-205ENST00000522328 CAMK2BQ13554 666 aa9.31□□□□□ -0.92
SH2D4A-205ENST00000522328 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
SH2D4A-205ENST00000522328 KNSTRNQ9Y448 316 aa9.31□□□□□ -0.92
SH2D4A-205ENST00000522328 GYS1P13807 737 aa9.3□□□□□ -0.92
SH2D4A-205ENST00000522328 BMP2KQ9NSY1 1161 aaPredicted RBP9.3□□□□□ -0.92
SH2D4A-205ENST00000522328 PARP3Q9Y6F1 533 aa9.3□□□□□ -0.92
SH2D4A-205ENST00000522328 C4AP0C0L4 1744 aa9.3□□□□□ -0.92
SH2D4A-205ENST00000522328 HSPA6P17066 643 aa9.29□□□□□ -0.92
SH2D4A-205ENST00000522328 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
SH2D4A-205ENST00000522328 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
SH2D4A-205ENST00000522328 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
SH2D4A-205ENST00000522328 KIAA1551Q9HCM1 1747 aa9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 IL13P35225 146 aa9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 ZNF526Q8TF50 670 aaPredicted RBP9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 WWC3Q9ULE0 1092 aa9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-205ENST00000522328 A0A0G2JLW4 131 aa9.27□□□□□ -0.93
SH2D4A-205ENST00000522328 FCHSD2O94868 740 aa9.27□□□□□ -0.93
SH2D4A-205ENST00000522328 CCER1Q8TC90 406 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-205ENST00000522328 MRC1P22897 1456 aa9.27□□□□□ -0.93
SH2D4A-205ENST00000522328 TJP1Q07157 1748 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 KIF3CO14782 793 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 DPEP1P16444 411 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 SLC52A2Q9HAB3 445 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 PIM2Q9P1W9 311 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 SCN11AQ9UI33 1791 aa9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 MYH14Q7Z406 1995 aaKnown RBP9.26□□□□□ -0.93
SH2D4A-205ENST00000522328 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
SH2D4A-205ENST00000522328 ZPR1O75312 459 aa9.25□□□□□ -0.93
SH2D4A-205ENST00000522328 TOMM70O94826 608 aa9.25□□□□□ -0.93
SH2D4A-205ENST00000522328 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms