RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 COL15A1P39059 1388 aa27.63■■■□□ 2.01
SDCBP-209ENST00000522243 CEMIPQ8WUJ3 1361 aa27.63■■■□□ 2.01
SDCBP-209ENST00000522243 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
SDCBP-209ENST00000522243 KCNQ3O43525 872 aa27.62■■■□□ 2.01
SDCBP-209ENST00000522243 DPEP1P16444 411 aa27.61■■■□□ 2.01
SDCBP-209ENST00000522243 MCM10Q7L590 875 aa27.61■■■□□ 2.01
SDCBP-209ENST00000522243 BTBD11A6QL63 1104 aa27.6■■■□□ 2.01
SDCBP-209ENST00000522243 STARD3NLO95772 234 aa27.6■■■□□ 2.01
SDCBP-209ENST00000522243 RTF1Q92541 710 aaKnown RBP27.6■■■□□ 2.01
SDCBP-209ENST00000522243 NARFQ9UHQ1 456 aa27.6■■■□□ 2.01
SDCBP-209ENST00000522243 TM4SF1P30408 202 aa27.59■■■□□ 2.01
SDCBP-209ENST00000522243 DCTN1Q14203 1278 aa27.59■■■□□ 2.01
SDCBP-209ENST00000522243 BCS1LQ9Y276 419 aa27.59■■■□□ 2.01
SDCBP-209ENST00000522243 FMNL2Q96PY5 1086 aa27.58■■■□□ 2.01
SDCBP-209ENST00000522243 POLRMTO00411 1230 aaKnown RBP27.57■■■□□ 2
SDCBP-209ENST00000522243 BCL2L12Q9HB09 334 aa27.57■■■□□ 2
SDCBP-209ENST00000522243 ZNF330Q9Y3S2 320 aaPredicted RBP27.56■■■□□ 2
SDCBP-209ENST00000522243 BRCA1P38398 1863 aaKnown RBP27.55■■■□□ 2
SDCBP-209ENST00000522243 NFIXQ14938 502 aa27.55■■■□□ 2
SDCBP-209ENST00000522243 TEX13AQ9BXU3 409 aaPredicted RBP27.55■■■□□ 2
SDCBP-209ENST00000522243 ATP10DQ9P241 1426 aa27.55■■■□□ 2
SDCBP-209ENST00000522243 AFDNP55196 1824 aaKnown RBP27.55■■■□□ 2
SDCBP-209ENST00000522243 EIF5P55010 431 aaKnown RBP27.54■■■□□ 2
SDCBP-209ENST00000522243 GOLGB1Q14789 3259 aaKnown RBP27.54■■■□□ 2
SDCBP-209ENST00000522243 DLG5Q8TDM6 1919 aa27.53■■■□□ 2
SDCBP-209ENST00000522243 A1BGP04217 495 aa27.53■■■□□ 2
SDCBP-209ENST00000522243 KCNA3P22001 575 aa27.53■■■□□ 2
SDCBP-209ENST00000522243 DDX10Q13206 875 aaKnown RBP27.52■■■□□ 2
SDCBP-209ENST00000522243 PRAMEF22A3QJZ6 481 aa27.51■■□□□ 1.99
SDCBP-209ENST00000522243 GIGYF1O75420 1035 aaPredicted RBP27.51■■□□□ 1.99
SDCBP-209ENST00000522243 NEFMP07197 916 aa27.51■■□□□ 1.99
SDCBP-209ENST00000522243 CHRNA5P30532 468 aa27.51■■□□□ 1.99
SDCBP-209ENST00000522243 USP16Q9Y5T5 823 aa27.51■■□□□ 1.99
SDCBP-209ENST00000522243 A0A087WZG4 1122 aa27.5■■□□□ 1.99
SDCBP-209ENST00000522243 HTATSF1O43719 755 aaKnown RBP27.5■■□□□ 1.99
SDCBP-209ENST00000522243 BICDL1Q6ZP65 573 aa27.5■■□□□ 1.99
SDCBP-209ENST00000522243 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
SDCBP-209ENST00000522243 SERPINB2P05120 415 aa27.49■■□□□ 1.99
SDCBP-209ENST00000522243 C1QTNF8P60827 252 aa27.49■■□□□ 1.99
SDCBP-209ENST00000522243 ARHGAP27Q6ZUM4 889 aa27.49■■□□□ 1.99
SDCBP-209ENST00000522243 ZNF526Q8TF50 670 aaPredicted RBP27.49■■□□□ 1.99
SDCBP-209ENST00000522243 PIM2Q9P1W9 311 aa27.49■■□□□ 1.99
SDCBP-209ENST00000522243 ADCY9O60503 1353 aa27.48■■□□□ 1.99
SDCBP-209ENST00000522243 NRXN2Q9P2S2 1712 aa27.48■■□□□ 1.99
SDCBP-209ENST00000522243 IL6STP40189 918 aaPredicted RBP27.48■■□□□ 1.99
SDCBP-209ENST00000522243 PIP4K2AP48426 406 aaPredicted RBP27.48■■□□□ 1.99
SDCBP-209ENST00000522243 PLEKHF1Q96S99 279 aa27.48■■□□□ 1.99
SDCBP-209ENST00000522243 MIS18AQ9NYP9 233 aa27.47■■□□□ 1.99
SDCBP-209ENST00000522243 ARFGEF1Q9Y6D6 1849 aa27.46■■□□□ 1.99
SDCBP-209ENST00000522243 RALBP1Q15311 655 aa27.46■■□□□ 1.99
SDCBP-209ENST00000522243 TAF7Q15545 349 aaPredicted RBP27.46■■□□□ 1.99
SDCBP-209ENST00000522243 TBC1D9BQ66K14 1250 aa27.46■■□□□ 1.99
SDCBP-209ENST00000522243 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
SDCBP-209ENST00000522243 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.98
SDCBP-209ENST00000522243 SNRPA1P09661 255 aaKnown RBP27.44■■□□□ 1.98
SDCBP-209ENST00000522243 DALRD3Q5D0E6 543 aaKnown RBP27.44■■□□□ 1.98
SDCBP-209ENST00000522243 GPBP1L1Q9HC44 474 aaPredicted RBP27.44■■□□□ 1.98
SDCBP-209ENST00000522243 NFE2L2Q16236 605 aa27.43■■□□□ 1.98
SDCBP-209ENST00000522243 THUMPD2Q9BTF0 503 aaKnown RBP27.42■■□□□ 1.98
SDCBP-209ENST00000522243 MAPK8IP3Q9UPT6 1336 aa27.41■■□□□ 1.98
SDCBP-209ENST00000522243 CARMIL3Q8ND23 1372 aa27.41■■□□□ 1.98
SDCBP-209ENST00000522243 CAMTA2O94983 1202 aa27.4■■□□□ 1.98
SDCBP-209ENST00000522243 DZIP3Q86Y13 1208 aaKnown RBP27.4■■□□□ 1.98
SDCBP-209ENST00000522243 PNNQ9H307 717 aaKnown RBP27.4■■□□□ 1.98
SDCBP-209ENST00000522243 CCDC24Q8N4L8 307 aa27.39■■□□□ 1.98
SDCBP-209ENST00000522243 BCORQ6W2J9 1755 aa27.39■■□□□ 1.98
SDCBP-209ENST00000522243 SENP3-EIF4A1A0A087X0R7 540 aa27.38■■□□□ 1.97
SDCBP-209ENST00000522243 KDM3BQ7LBC6 1761 aa27.37■■□□□ 1.97
SDCBP-209ENST00000522243 C2CD5Q86YS7 1000 aa27.37■■□□□ 1.97
SDCBP-209ENST00000522243 ANKRD31Q8N7Z5 1873 aa27.36■■□□□ 1.97
SDCBP-209ENST00000522243 DLEC1Q9Y238 1755 aa27.36■■□□□ 1.97
SDCBP-209ENST00000522243 NBPF26B4DH59 902 aa27.36■■□□□ 1.97
SDCBP-209ENST00000522243 NBPF10Q6P3W6 841 aaKnown RBP27.36■■□□□ 1.97
SDCBP-209ENST00000522243 NBPF15Q8N660 670 aa27.36■■□□□ 1.97
SDCBP-209ENST00000522243 MYBBP1AQ9BQG0 1328 aaKnown RBP27.36■■□□□ 1.97
SDCBP-209ENST00000522243 PNISRQ8TF01 805 aaKnown RBP27.35■■□□□ 1.97
SDCBP-209ENST00000522243 LAMB4A4D0S4 1761 aa27.35■■□□□ 1.97
SDCBP-209ENST00000522243 C9orf131Q5VYM1 1079 aa27.34■■□□□ 1.97
SDCBP-209ENST00000522243 PRR5LQ6MZQ0 368 aa27.34■■□□□ 1.97
SDCBP-209ENST00000522243 SETDB2Q96T68 719 aa27.34■■□□□ 1.97
SDCBP-209ENST00000522243 H0YIN7 160 aa27.33■■□□□ 1.97
SDCBP-209ENST00000522243 NPHP1O15259 732 aa27.31■■□□□ 1.96
SDCBP-209ENST00000522243 RIPK4P57078 832 aa27.31■■□□□ 1.96
SDCBP-209ENST00000522243 EIF4A1P60842 406 aaKnown RBP27.31■■□□□ 1.96
SDCBP-209ENST00000522243 TTLL6Q8N841 843 aa27.31■■□□□ 1.96
SDCBP-209ENST00000522243 CCDC146Q8IYE0 955 aa27.3■■□□□ 1.96
SDCBP-209ENST00000522243 SBF1O95248 1867 aa27.3■■□□□ 1.96
SDCBP-209ENST00000522243 NGEFQ8N5V2 710 aa27.29■■□□□ 1.96
SDCBP-209ENST00000522243 CNBD1Q8NA66 436 aa27.29■■□□□ 1.96
SDCBP-209ENST00000522243 ZNF622Q969S3 477 aaKnown RBP eCLIP27.29■■□□□ 1.96
SDCBP-209ENST00000522243 BRIP1Q9BX63 1249 aa27.29■■□□□ 1.96
SDCBP-209ENST00000522243 RNF181Q9P0P0 153 aa27.29■■□□□ 1.96
SDCBP-209ENST00000522243 COL11A2P13942 1736 aaPredicted RBP27.28■■□□□ 1.96
SDCBP-209ENST00000522243 PDE6BP35913 854 aa27.28■■□□□ 1.96
SDCBP-209ENST00000522243 RASSF7Q02833 373 aa27.28■■□□□ 1.96
SDCBP-209ENST00000522243 RRP7AQ9Y3A4 280 aaKnown RBP27.28■■□□□ 1.96
SDCBP-209ENST00000522243 KIF3CO14782 793 aa27.27■■□□□ 1.96
SDCBP-209ENST00000522243 TMPOP42166 694 aaKnown RBP27.27■■□□□ 1.96
SDCBP-209ENST00000522243 CLEC4GQ6UXB4 293 aa27.27■■□□□ 1.96
SDCBP-209ENST00000522243 ZNF652Q9Y2D9 606 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms