RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 TGFB2P61812 414 aa25.72■■□□□ 1.71
R3HCC1-207ENST00000521588 RALBP1Q15311 655 aa25.72■■□□□ 1.71
R3HCC1-207ENST00000521588 NARFQ9UHQ1 456 aa25.72■■□□□ 1.71
R3HCC1-207ENST00000521588 ZPR1O75312 459 aa25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 DDR1Q08345 913 aa25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 USPL1Q5W0Q7 1092 aa25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 MCM10Q7L590 875 aa25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 RTF1Q92541 710 aaKnown RBP25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 FMNL2Q96PY5 1086 aa25.71■■□□□ 1.71
R3HCC1-207ENST00000521588 COL15A1P39059 1388 aa25.7■■□□□ 1.71
R3HCC1-207ENST00000521588 EIF5P55010 431 aaKnown RBP25.7■■□□□ 1.7
R3HCC1-207ENST00000521588 PLEKHF1Q96S99 279 aa25.7■■□□□ 1.7
R3HCC1-207ENST00000521588 KIAA1551Q9HCM1 1747 aa25.7■■□□□ 1.7
R3HCC1-207ENST00000521588 PXDNLA1KZ92 1463 aa25.7■■□□□ 1.7
R3HCC1-207ENST00000521588 CANXP27824 592 aaKnown RBP25.69■■□□□ 1.7
R3HCC1-207ENST00000521588 DCTN1Q14203 1278 aa25.68■■□□□ 1.7
R3HCC1-207ENST00000521588 BCL2L12Q9HB09 334 aa25.67■■□□□ 1.7
R3HCC1-207ENST00000521588 A0A0G2JLW4 131 aa25.66■■□□□ 1.7
R3HCC1-207ENST00000521588 POLRMTO00411 1230 aaKnown RBP25.66■■□□□ 1.7
R3HCC1-207ENST00000521588 WWC3Q9ULE0 1092 aa25.66■■□□□ 1.7
R3HCC1-207ENST00000521588 N4BP2Q86UW6 1770 aaPredicted RBP25.64■■□□□ 1.7
R3HCC1-207ENST00000521588 NEFMP07197 916 aa25.64■■□□□ 1.7
R3HCC1-207ENST00000521588 DPEP1P16444 411 aa25.64■■□□□ 1.7
R3HCC1-207ENST00000521588 A0A087WZG4 1122 aa25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 A1BGP04217 495 aa25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 KCNA3P22001 575 aa25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 IL6STP40189 918 aaPredicted RBP25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 NFIXQ14938 502 aa25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 TAF7Q15545 349 aaPredicted RBP25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 PNNQ9H307 717 aaKnown RBP25.63■■□□□ 1.69
R3HCC1-207ENST00000521588 NFE2L2Q16236 605 aa25.62■■□□□ 1.69
R3HCC1-207ENST00000521588 USP16Q9Y5T5 823 aa25.62■■□□□ 1.69
R3HCC1-207ENST00000521588 DLG5Q8TDM6 1919 aa25.61■■□□□ 1.69
R3HCC1-207ENST00000521588 SNRPA1P09661 255 aaKnown RBP25.6■■□□□ 1.69
R3HCC1-207ENST00000521588 PRAMEF22A3QJZ6 481 aa25.59■■□□□ 1.69
R3HCC1-207ENST00000521588 MYBBP1AQ9BQG0 1328 aaKnown RBP25.59■■□□□ 1.69
R3HCC1-207ENST00000521588 BRCA1P38398 1863 aaKnown RBP25.57■■□□□ 1.68
R3HCC1-207ENST00000521588 MIS18AQ9NYP9 233 aa25.57■■□□□ 1.68
R3HCC1-207ENST00000521588 TBC1D2BQ9UPU7 963 aa25.57■■□□□ 1.68
R3HCC1-207ENST00000521588 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
R3HCC1-207ENST00000521588 AFDNP55196 1824 aaKnown RBP25.56■■□□□ 1.68
R3HCC1-207ENST00000521588 SERPINB2P05120 415 aa25.56■■□□□ 1.68
R3HCC1-207ENST00000521588 NRXN2Q9P2S2 1712 aa25.56■■□□□ 1.68
R3HCC1-207ENST00000521588 MAPK8IP3Q9UPT6 1336 aa25.56■■□□□ 1.68
R3HCC1-207ENST00000521588 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
R3HCC1-207ENST00000521588 PNISRQ8TF01 805 aaKnown RBP25.54■■□□□ 1.68
R3HCC1-207ENST00000521588 ZNF330Q9Y3S2 320 aaPredicted RBP25.54■■□□□ 1.68
R3HCC1-207ENST00000521588 ADCY9O60503 1353 aa25.54■■□□□ 1.68
R3HCC1-207ENST00000521588 CAMTA2O94983 1202 aa25.53■■□□□ 1.68
R3HCC1-207ENST00000521588 CHRNA5P30532 468 aa25.53■■□□□ 1.68
R3HCC1-207ENST00000521588 TBC1D9BQ66K14 1250 aa25.53■■□□□ 1.68
R3HCC1-207ENST00000521588 THUMPD2Q9BTF0 503 aaKnown RBP25.53■■□□□ 1.68
R3HCC1-207ENST00000521588 NBPF26B4DH59 902 aa25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 PIP4K2AP48426 406 aaPredicted RBP25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 NBPF10Q6P3W6 841 aaKnown RBP25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 NBPF15Q8N660 670 aa25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 SCN7AQ01118 1682 aa25.51■■□□□ 1.67
R3HCC1-207ENST00000521588 DALRD3Q5D0E6 543 aaKnown RBP25.5■■□□□ 1.67
R3HCC1-207ENST00000521588 KDM3BQ7LBC6 1761 aa25.5■■□□□ 1.67
R3HCC1-207ENST00000521588 DZIP3Q86Y13 1208 aaKnown RBP25.5■■□□□ 1.67
R3HCC1-207ENST00000521588 PRKRIP1Q9H875 184 aaPredicted RBP25.5■■□□□ 1.67
R3HCC1-207ENST00000521588 RIPK4P57078 832 aa25.49■■□□□ 1.67
R3HCC1-207ENST00000521588 EIF4A1P60842 406 aaKnown RBP25.49■■□□□ 1.67
R3HCC1-207ENST00000521588 ARHGAP27Q6ZUM4 889 aa25.49■■□□□ 1.67
R3HCC1-207ENST00000521588 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
R3HCC1-207ENST00000521588 GIGYF1O75420 1035 aaPredicted RBP25.48■■□□□ 1.67
R3HCC1-207ENST00000521588 TMPOP42166 694 aaKnown RBP25.48■■□□□ 1.67
R3HCC1-207ENST00000521588 CARMIL3Q8ND23 1372 aa25.46■■□□□ 1.67
R3HCC1-207ENST00000521588 CLEC4GQ6UXB4 293 aa25.46■■□□□ 1.67
R3HCC1-207ENST00000521588 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
R3HCC1-207ENST00000521588 SETDB2Q96T68 719 aa25.45■■□□□ 1.66
R3HCC1-207ENST00000521588 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
R3HCC1-207ENST00000521588 RGL2O15211 777 aa25.44■■□□□ 1.66
R3HCC1-207ENST00000521588 C1QTNF8P60827 252 aa25.44■■□□□ 1.66
R3HCC1-207ENST00000521588 PRR5LQ6MZQ0 368 aa25.44■■□□□ 1.66
R3HCC1-207ENST00000521588 C2CD5Q86YS7 1000 aa25.43■■□□□ 1.66
R3HCC1-207ENST00000521588 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
R3HCC1-207ENST00000521588 ADAMTS8Q9UP79 889 aa25.43■■□□□ 1.66
R3HCC1-207ENST00000521588 LAMB4A4D0S4 1761 aa25.42■■□□□ 1.66
R3HCC1-207ENST00000521588 H0YIN7 160 aa25.42■■□□□ 1.66
R3HCC1-207ENST00000521588 CCDC146Q8IYE0 955 aa25.42■■□□□ 1.66
R3HCC1-207ENST00000521588 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
R3HCC1-207ENST00000521588 BABAM1Q9NWV8 329 aa25.42■■□□□ 1.66
R3HCC1-207ENST00000521588 LMOD3Q0VAK6 560 aa25.41■■□□□ 1.66
R3HCC1-207ENST00000521588 WDR43Q15061 677 aaKnown RBP eCLIP25.41■■□□□ 1.66
R3HCC1-207ENST00000521588 GPBP1L1Q9HC44 474 aaPredicted RBP25.41■■□□□ 1.66
R3HCC1-207ENST00000521588 PDZRN3Q9UPQ7 1066 aa25.41■■□□□ 1.66
R3HCC1-207ENST00000521588 DLEC1Q9Y238 1755 aa25.41■■□□□ 1.66
R3HCC1-207ENST00000521588 ANKRD31Q8N7Z5 1873 aa25.4■■□□□ 1.66
R3HCC1-207ENST00000521588 TSPYL4Q9UJ04 414 aa25.4■■□□□ 1.66
R3HCC1-207ENST00000521588 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
R3HCC1-207ENST00000521588 PDE6BP35913 854 aa25.39■■□□□ 1.66
R3HCC1-207ENST00000521588 CCDC24Q8N4L8 307 aa25.39■■□□□ 1.66
R3HCC1-207ENST00000521588 TTLL6Q8N841 843 aa25.39■■□□□ 1.66
R3HCC1-207ENST00000521588 ZNF652Q9Y2D9 606 aa25.39■■□□□ 1.66
R3HCC1-207ENST00000521588 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
R3HCC1-207ENST00000521588 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms