RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 COL15A1P39059 1388 aa34.55■■■■□ 3.12
LAPTM4B-203ENST00000521545 CANXP27824 592 aaKnown RBP34.55■■■■□ 3.12
LAPTM4B-203ENST00000521545 NARFQ9UHQ1 456 aa34.55■■■■□ 3.12
LAPTM4B-203ENST00000521545 HEG1Q9ULI3 1381 aa34.54■■■■□ 3.12
LAPTM4B-203ENST00000521545 BTBD11A6QL63 1104 aa34.54■■■■□ 3.12
LAPTM4B-203ENST00000521545 FMNL2Q96PY5 1086 aa34.54■■■■□ 3.12
LAPTM4B-203ENST00000521545 NEFMP07197 916 aa34.52■■■■□ 3.12
LAPTM4B-203ENST00000521545 DPEP1P16444 411 aa34.52■■■■□ 3.12
LAPTM4B-203ENST00000521545 TM4SF1P30408 202 aa34.52■■■■□ 3.12
LAPTM4B-203ENST00000521545 DDR1Q08345 913 aa34.52■■■■□ 3.12
LAPTM4B-203ENST00000521545 BCS1LQ9Y276 419 aa34.51■■■■□ 3.12
LAPTM4B-203ENST00000521545 SIPA1L3O60292 1781 aaPredicted RBP34.51■■■■□ 3.11
LAPTM4B-203ENST00000521545 N4BP2Q86UW6 1770 aaPredicted RBP34.5■■■■□ 3.11
LAPTM4B-203ENST00000521545 A0A087WZG4 1122 aa34.49■■■■□ 3.11
LAPTM4B-203ENST00000521545 POLRMTO00411 1230 aaKnown RBP34.48■■■■□ 3.11
LAPTM4B-203ENST00000521545 HTATSF1O43719 755 aaKnown RBP34.48■■■■□ 3.11
LAPTM4B-203ENST00000521545 MCM10Q7L590 875 aa34.48■■■■□ 3.11
LAPTM4B-203ENST00000521545 EIF5P55010 431 aaKnown RBP34.47■■■■□ 3.11
LAPTM4B-203ENST00000521545 GIGYF1O75420 1035 aaPredicted RBP34.46■■■■□ 3.11
LAPTM4B-203ENST00000521545 KIAA1551Q9HCM1 1747 aa34.46■■■■□ 3.11
LAPTM4B-203ENST00000521545 KCNQ3O43525 872 aa34.45■■■■□ 3.11
LAPTM4B-203ENST00000521545 NPM2Q86SE8 214 aaKnown RBP34.45■■■■□ 3.11
LAPTM4B-203ENST00000521545 NFIXQ14938 502 aa34.44■■■■□ 3.1
LAPTM4B-203ENST00000521545 PIM2Q9P1W9 311 aa34.44■■■■□ 3.1
LAPTM4B-203ENST00000521545 ZNF330Q9Y3S2 320 aaPredicted RBP34.43■■■■□ 3.1
LAPTM4B-203ENST00000521545 ATP10DQ9P241 1426 aa34.43■■■■□ 3.1
LAPTM4B-203ENST00000521545 C1QTNF8P60827 252 aa34.42■■■■□ 3.1
LAPTM4B-203ENST00000521545 DCTN1Q14203 1278 aa34.42■■■■□ 3.1
LAPTM4B-203ENST00000521545 BCL2L12Q9HB09 334 aa34.42■■■■□ 3.1
LAPTM4B-203ENST00000521545 KCNA3P22001 575 aa34.41■■■■□ 3.1
LAPTM4B-203ENST00000521545 IL6STP40189 918 aaPredicted RBP34.41■■■■□ 3.1
LAPTM4B-203ENST00000521545 ARHGAP27Q6ZUM4 889 aa34.41■■■■□ 3.1
LAPTM4B-203ENST00000521545 PNNQ9H307 717 aaKnown RBP34.41■■■■□ 3.1
LAPTM4B-203ENST00000521545 A1BGP04217 495 aa34.4■■■■□ 3.1
LAPTM4B-203ENST00000521545 RALBP1Q15311 655 aa34.39■■■■□ 3.1
LAPTM4B-203ENST00000521545 SERPINB2P05120 415 aa34.38■■■■□ 3.09
LAPTM4B-203ENST00000521545 DALRD3Q5D0E6 543 aaKnown RBP34.38■■■■□ 3.09
LAPTM4B-203ENST00000521545 GPBP1L1Q9HC44 474 aaPredicted RBP34.38■■■■□ 3.09
LAPTM4B-203ENST00000521545 SNRPA1P09661 255 aaKnown RBP34.37■■■■□ 3.09
LAPTM4B-203ENST00000521545 TAF7Q15545 349 aaPredicted RBP34.37■■■■□ 3.09
LAPTM4B-203ENST00000521545 ADCY9O60503 1353 aa34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 CHRNA5P30532 468 aa34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 DDX10Q13206 875 aaKnown RBP34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 BICDL1Q6ZP65 573 aa34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 TBC1D2BQ9UPU7 963 aa34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 USP16Q9Y5T5 823 aa34.36■■■■□ 3.09
LAPTM4B-203ENST00000521545 ZNF526Q8TF50 670 aaPredicted RBP34.34■■■■□ 3.09
LAPTM4B-203ENST00000521545 PLEKHF1Q96S99 279 aa34.34■■■■□ 3.09
LAPTM4B-203ENST00000521545 MAPK8IP3Q9UPT6 1336 aa34.33■■■■□ 3.09
LAPTM4B-203ENST00000521545 BRCA1P38398 1863 aaKnown RBP34.33■■■■□ 3.09
LAPTM4B-203ENST00000521545 NFE2L2Q16236 605 aa34.31■■■■□ 3.08
LAPTM4B-203ENST00000521545 AFDNP55196 1824 aaKnown RBP34.3■■■■□ 3.08
LAPTM4B-203ENST00000521545 TBC1D9BQ66K14 1250 aa34.3■■■■□ 3.08
LAPTM4B-203ENST00000521545 PNISRQ8TF01 805 aaKnown RBP34.3■■■■□ 3.08
LAPTM4B-203ENST00000521545 PRAMEF22A3QJZ6 481 aa34.29■■■■□ 3.08
LAPTM4B-203ENST00000521545 NRXN2Q9P2S2 1712 aa34.28■■■■□ 3.08
LAPTM4B-203ENST00000521545 DZIP3Q86Y13 1208 aaKnown RBP34.28■■■■□ 3.08
LAPTM4B-203ENST00000521545 MIS18AQ9NYP9 233 aa34.28■■■■□ 3.08
LAPTM4B-203ENST00000521545 ARFGEF1Q9Y6D6 1849 aa34.27■■■■□ 3.08
LAPTM4B-203ENST00000521545 CAMTA2O94983 1202 aa34.26■■■■□ 3.08
LAPTM4B-203ENST00000521545 PIP4K2AP48426 406 aaPredicted RBP34.26■■■■□ 3.08
LAPTM4B-203ENST00000521545 SETDB2Q96T68 719 aa34.26■■■■□ 3.08
LAPTM4B-203ENST00000521545 SENP3-EIF4A1A0A087X0R7 540 aa34.25■■■■□ 3.07
LAPTM4B-203ENST00000521545 DLG5Q8TDM6 1919 aa34.24■■■■□ 3.07
LAPTM4B-203ENST00000521545 H0YIN7 160 aa34.24■■■■□ 3.07
LAPTM4B-203ENST00000521545 C2CD5Q86YS7 1000 aa34.24■■■■□ 3.07
LAPTM4B-203ENST00000521545 SCN7AQ01118 1682 aa34.24■■■■□ 3.07
LAPTM4B-203ENST00000521545 CARMIL3Q8ND23 1372 aa34.23■■■■□ 3.07
LAPTM4B-203ENST00000521545 NPHP1O15259 732 aa34.22■■■■□ 3.07
LAPTM4B-203ENST00000521545 MYBBP1AQ9BQG0 1328 aaKnown RBP34.22■■■■□ 3.07
LAPTM4B-203ENST00000521545 TTLL6Q8N841 843 aa34.21■■■■□ 3.07
LAPTM4B-203ENST00000521545 C9orf131Q5VYM1 1079 aa34.2■■■■□ 3.07
LAPTM4B-203ENST00000521545 PDZRN3Q9UPQ7 1066 aa34.2■■■■□ 3.07
LAPTM4B-203ENST00000521545 ZNF652Q9Y2D9 606 aa34.2■■■■□ 3.07
LAPTM4B-203ENST00000521545 PDE6BP35913 854 aa34.19■■■■□ 3.06
LAPTM4B-203ENST00000521545 CLEC4GQ6UXB4 293 aa34.19■■■■□ 3.06
LAPTM4B-203ENST00000521545 THUMPD2Q9BTF0 503 aaKnown RBP34.19■■■■□ 3.06
LAPTM4B-203ENST00000521545 BRIP1Q9BX63 1249 aa34.19■■■■□ 3.06
LAPTM4B-203ENST00000521545 PRR5LQ6MZQ0 368 aa34.18■■■■□ 3.06
LAPTM4B-203ENST00000521545 NBPF26B4DH59 902 aa34.17■■■■□ 3.06
LAPTM4B-203ENST00000521545 NBPF10Q6P3W6 841 aaKnown RBP34.17■■■■□ 3.06
LAPTM4B-203ENST00000521545 NBPF15Q8N660 670 aa34.17■■■■□ 3.06
LAPTM4B-203ENST00000521545 CNBD1Q8NA66 436 aa34.17■■■■□ 3.06
LAPTM4B-203ENST00000521545 RIPK4P57078 832 aa34.16■■■■□ 3.06
LAPTM4B-203ENST00000521545 EIF4A1P60842 406 aaKnown RBP34.15■■■■□ 3.06
LAPTM4B-203ENST00000521545 ST5P78524 1137 aa34.15■■■■□ 3.06
LAPTM4B-203ENST00000521545 CCDC24Q8N4L8 307 aa34.15■■■■□ 3.06
LAPTM4B-203ENST00000521545 ZNF622Q969S3 477 aaKnown RBP eCLIP34.14■■■■□ 3.06
LAPTM4B-203ENST00000521545 RNF181Q9P0P0 153 aa34.14■■■■□ 3.06
LAPTM4B-203ENST00000521545 BCORQ6W2J9 1755 aa34.13■■■■□ 3.05
LAPTM4B-203ENST00000521545 KDM3BQ7LBC6 1761 aa34.11■■■■□ 3.05
LAPTM4B-203ENST00000521545 DLEC1Q9Y238 1755 aa34.11■■■■□ 3.05
LAPTM4B-203ENST00000521545 RGL2O15211 777 aa34.11■■■■□ 3.05
LAPTM4B-203ENST00000521545 LMOD3Q0VAK6 560 aa34.11■■■■□ 3.05
LAPTM4B-203ENST00000521545 NBPF5PQ86XG9 351 aaPredicted RBP34.11■■■■□ 3.05
LAPTM4B-203ENST00000521545 WDR43Q15061 677 aaKnown RBP eCLIP34.1■■■■□ 3.05
LAPTM4B-203ENST00000521545 TSPYL4Q9UJ04 414 aa34.1■■■■□ 3.05
LAPTM4B-203ENST00000521545 KIF3CO14782 793 aa34.09■■■■□ 3.05
LAPTM4B-203ENST00000521545 TMPOP42166 694 aaKnown RBP34.09■■■■□ 3.05
LAPTM4B-203ENST00000521545 NIP7Q9Y221 180 aaKnown RBP eCLIP34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms