RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 MAP2K2P36507 400 aa10.94□□□□□ -0.66
HMBOX1-208ENST00000521516 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
HMBOX1-208ENST00000521516 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
HMBOX1-208ENST00000521516 HABP4Q5JVS0 413 aaKnown RBP10.93□□□□□ -0.66
HMBOX1-208ENST00000521516 MYH14Q7Z406 1995 aaKnown RBP10.93□□□□□ -0.66
HMBOX1-208ENST00000521516 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
HMBOX1-208ENST00000521516 FER1L6Q2WGJ9 1857 aa10.93□□□□□ -0.66
HMBOX1-208ENST00000521516 NRXN2Q9P2S2 1712 aa10.92□□□□□ -0.66
HMBOX1-208ENST00000521516 HDGFL2Q7Z4V5 671 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-208ENST00000521516 FBLN1P23142 703 aa10.92□□□□□ -0.66
HMBOX1-208ENST00000521516 CYP4F22Q6NT55 531 aa10.92□□□□□ -0.66
HMBOX1-208ENST00000521516 DDX21Q9NR30 783 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMBOX1-208ENST00000521516 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
HMBOX1-208ENST00000521516 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 MAP1SQ66K74 1059 aaPredicted RBP10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 ADAMTS7Q9UKP4 1686 aa10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 NCAPD2Q15021 1401 aa10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
HMBOX1-208ENST00000521516 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 COG3Q96JB2 828 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 TAOK3Q9H2K8 898 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 AFDNP55196 1824 aaKnown RBP10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 H0YIN7 160 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 AOC2O75106 756 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 EPHX2P34913 555 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 SLC12A5Q9H2X9 1139 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 SPG7Q9UQ90 795 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 INSRP06213 1382 aa10.89□□□□□ -0.67
HMBOX1-208ENST00000521516 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■□□□ 12.6
HMBOX1-208ENST00000521516 TLL2Q9Y6L7 1015 aa10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 C21orf2O43822 256 aa10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
HMBOX1-208ENST00000521516 NFIXQ14938 502 aa10.87□□□□□ -0.67
HMBOX1-208ENST00000521516 RAB3GAP2Q9H2M9 1393 aa10.87□□□□□ -0.67
HMBOX1-208ENST00000521516 DLL1O00548 723 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 CRKLP46109 303 aaKnown RBP10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 FXR1P51114 621 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 GRM1Q13255 1194 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 RRS1Q15050 365 aaKnown RBP10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 PHKG2P15735 406 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 HSP90AB2PQ58FF8 381 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 CST9Q5W186 159 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 CARMIL3Q8ND23 1372 aa10.86□□□□□ -0.67
HMBOX1-208ENST00000521516 IFNL2Q8IZJ0 200 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 SERPINB2P05120 415 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 USPL1Q5W0Q7 1092 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 HHIPL1Q96JK4 782 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 ZNF541Q9H0D2 1346 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 KIF24Q5T7B8 1368 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 TONSLQ96HA7 1378 aa10.85□□□□□ -0.67
HMBOX1-208ENST00000521516 CUL9Q8IWT3 2517 aa10.84□□□□□ -0.67
HMBOX1-208ENST00000521516 FMR1Q06787 632 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMBOX1-208ENST00000521516 ERVV-2B6SEH9 535 aa10.84□□□□□ -0.67
HMBOX1-208ENST00000521516 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
HMBOX1-208ENST00000521516 ZPR1O75312 459 aa10.83□□□□□ -0.68
HMBOX1-208ENST00000521516 FLT4P35916 1363 aa10.83□□□□□ -0.68
HMBOX1-208ENST00000521516 TRPM7Q96QT4 1865 aa10.82□□□□□ -0.68
HMBOX1-208ENST00000521516 SAPCD2Q86UD0 394 aa10.82□□□□□ -0.68
HMBOX1-208ENST00000521516 ZNF622Q969S3 477 aaKnown RBP eCLIP10.82□□□□□ -0.681e-7■■□□□ 13.2
HMBOX1-208ENST00000521516 SOGA3Q5TF21 947 aa10.82□□□□□ -0.68
HMBOX1-208ENST00000521516 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
HMBOX1-208ENST00000521516 RNF123Q5XPI4 1314 aa10.82□□□□□ -0.68
HMBOX1-208ENST00000521516 COL11A2P13942 1736 aaPredicted RBP10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 SOS1Q07889 1333 aaPredicted RBP10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 ANKRD31Q8N7Z5 1873 aa10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 NARFQ9UHQ1 456 aa10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 TJP1Q07157 1748 aa10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 BRIP1Q9BX63 1249 aa10.81□□□□□ -0.68
HMBOX1-208ENST00000521516 A0A0C4DFX4 3053 aa10.8□□□□□ -0.68
HMBOX1-208ENST00000521516 SAGE1Q9NXZ1 904 aa10.8□□□□□ -0.68
HMBOX1-208ENST00000521516 TRAF5O00463 557 aa10.8□□□□□ -0.68
HMBOX1-208ENST00000521516 PDE6BP35913 854 aa10.8□□□□□ -0.68
HMBOX1-208ENST00000521516 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
HMBOX1-208ENST00000521516 FZD9O00144 591 aa10.79□□□□□ -0.68
HMBOX1-208ENST00000521516 GPC2Q8N158 579 aa10.79□□□□□ -0.68
HMBOX1-208ENST00000521516 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
HMBOX1-208ENST00000521516 CTU1Q7Z7A3 348 aaKnown RBP10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 C7orf43Q8WVR3 580 aa10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 HPS5Q9UPZ3 1129 aa10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 ARFGEF2Q9Y6D5 1785 aa10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 PTCD1O75127 700 aaKnown RBP10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 NOGQ13253 232 aa10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 STYK1Q6J9G0 422 aa10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 PRPF40BQ6NWY9 871 aaKnown RBP10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
HMBOX1-208ENST00000521516 ZIC5Q96T25 663 aa10.77□□□□□ -0.68
HMBOX1-208ENST00000521516 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
HMBOX1-208ENST00000521516 SZT2Q5T011 3432 aa10.76□□□□□ -0.69
HMBOX1-208ENST00000521516 FYB1O15117 783 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms