RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 NPC1L1Q9UHC9 1359 aa27.44■■□□□ 1.98
SNHG6-205ENST00000521399 CHRNA5P30532 468 aa27.43■■□□□ 1.98
SNHG6-205ENST00000521399 COL15A1P39059 1388 aa27.43■■□□□ 1.98
SNHG6-205ENST00000521399 COL3A1P02461 1466 aaPredicted RBP27.42■■□□□ 1.98
SNHG6-205ENST00000521399 UBR2Q8IWV8 1755 aa27.42■■□□□ 1.98
SNHG6-205ENST00000521399 C9orf131Q5VYM1 1079 aa27.41■■□□□ 1.98
SNHG6-205ENST00000521399 AFDNP55196 1824 aaKnown RBP27.4■■□□□ 1.98
SNHG6-205ENST00000521399 NFIXQ14938 502 aa27.4■■□□□ 1.98
SNHG6-205ENST00000521399 TOMM70O94826 608 aa27.39■■□□□ 1.98
SNHG6-205ENST00000521399 U2SURPO15042 1029 aaKnown RBP27.38■■□□□ 1.97
SNHG6-205ENST00000521399 BCL2L12Q9HB09 334 aa27.38■■□□□ 1.97
SNHG6-205ENST00000521399 NMRK2Q9NPI5 230 aa27.38■■□□□ 1.97
SNHG6-205ENST00000521399 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
SNHG6-205ENST00000521399 TTC5Q8N0Z6 440 aa27.37■■□□□ 1.97
SNHG6-205ENST00000521399 NRXN2Q9P2S2 1712 aa27.37■■□□□ 1.97
SNHG6-205ENST00000521399 CANXP27824 592 aaKnown RBP27.36■■□□□ 1.97
SNHG6-205ENST00000521399 IL17REQ8NFR9 667 aa27.36■■□□□ 1.97
SNHG6-205ENST00000521399 GAS2L2Q8NHY3 880 aa27.36■■□□□ 1.97
SNHG6-205ENST00000521399 GNAT3A8MTJ3 354 aa27.35■■□□□ 1.97
SNHG6-205ENST00000521399 STARD3NLO95772 234 aa27.35■■□□□ 1.97
SNHG6-205ENST00000521399 SBF1O95248 1867 aa27.35■■□□□ 1.97
SNHG6-205ENST00000521399 SERPINB2P05120 415 aa27.34■■□□□ 1.97
SNHG6-205ENST00000521399 TEFQ10587 303 aa27.34■■□□□ 1.97
SNHG6-205ENST00000521399 EIF5P55010 431 aaKnown RBP27.33■■□□□ 1.97
SNHG6-205ENST00000521399 ZNF790Q6PG37 636 aa27.33■■□□□ 1.97
SNHG6-205ENST00000521399 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
SNHG6-205ENST00000521399 RNF181Q9P0P0 153 aa27.33■■□□□ 1.97
SNHG6-205ENST00000521399 APLP1P51693 650 aa27.32■■□□□ 1.96
SNHG6-205ENST00000521399 SIPA1L3O60292 1781 aaPredicted RBP27.32■■□□□ 1.96
SNHG6-205ENST00000521399 HEG1Q9ULI3 1381 aa27.31■■□□□ 1.96
SNHG6-205ENST00000521399 A0A087WZG4 1122 aa27.3■■□□□ 1.96
SNHG6-205ENST00000521399 TEX13AQ9BXU3 409 aaPredicted RBP27.3■■□□□ 1.96
SNHG6-205ENST00000521399 KDM2BQ8NHM5 1336 aa27.29■■□□□ 1.96
SNHG6-205ENST00000521399 DLEC1Q9Y238 1755 aa27.29■■□□□ 1.96
SNHG6-205ENST00000521399 RBM46Q8TBY0 533 aaKnown RBP27.28■■□□□ 1.96
SNHG6-205ENST00000521399 BICDL1Q6ZP65 573 aa27.27■■□□□ 1.96
SNHG6-205ENST00000521399 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.95
SNHG6-205ENST00000521399 IFFO2Q5TF58 517 aa27.26■■□□□ 1.95
SNHG6-205ENST00000521399 C16orf71Q8IYS4 520 aaPredicted RBP27.26■■□□□ 1.95
SNHG6-205ENST00000521399 TTLL6Q8N841 843 aa27.26■■□□□ 1.95
SNHG6-205ENST00000521399 PHACTR3Q96KR7 559 aa27.26■■□□□ 1.95
SNHG6-205ENST00000521399 CARMIL3Q8ND23 1372 aa27.25■■□□□ 1.95
SNHG6-205ENST00000521399 RASSF7Q02833 373 aa27.25■■□□□ 1.95
SNHG6-205ENST00000521399 C2CD5Q86YS7 1000 aa27.25■■□□□ 1.95
SNHG6-205ENST00000521399 CFAP53Q96M91 514 aa27.25■■□□□ 1.95
SNHG6-205ENST00000521399 FMNL2Q96PY5 1086 aa27.25■■□□□ 1.95
SNHG6-205ENST00000521399 H0YIN7 160 aa27.24■■□□□ 1.95
SNHG6-205ENST00000521399 PRKAR2BP31323 418 aa27.24■■□□□ 1.95
SNHG6-205ENST00000521399 IL6STP40189 918 aaPredicted RBP27.24■■□□□ 1.95
SNHG6-205ENST00000521399 TBC1D9BQ66K14 1250 aa27.24■■□□□ 1.95
SNHG6-205ENST00000521399 RSPH6AQ9H0K4 717 aa27.24■■□□□ 1.95
SNHG6-205ENST00000521399 RRAGCQ9HB90 399 aa27.23■■□□□ 1.95
SNHG6-205ENST00000521399 TBC1D2BQ9UPU7 963 aa27.23■■□□□ 1.95
SNHG6-205ENST00000521399 ZNF330Q9Y3S2 320 aaPredicted RBP27.23■■□□□ 1.95
SNHG6-205ENST00000521399 SCN7AQ01118 1682 aa27.23■■□□□ 1.95
SNHG6-205ENST00000521399 ZC3H4Q9UPT8 1303 aaKnown RBP27.22■■□□□ 1.95
SNHG6-205ENST00000521399 DNAJC5GQ8N7S2 189 aa27.22■■□□□ 1.95
SNHG6-205ENST00000521399 TNRC6CQ9HCJ0 1690 aaKnown RBP27.21■■□□□ 1.95
SNHG6-205ENST00000521399 BTBD11A6QL63 1104 aa27.21■■□□□ 1.95
SNHG6-205ENST00000521399 KCNQ3O43525 872 aa27.21■■□□□ 1.95
SNHG6-205ENST00000521399 A1BGP04217 495 aa27.21■■□□□ 1.95
SNHG6-205ENST00000521399 LMNB1P20700 586 aa27.21■■□□□ 1.95
SNHG6-205ENST00000521399 ANKRD31Q8N7Z5 1873 aa27.21■■□□□ 1.95
SNHG6-205ENST00000521399 FSTL1Q12841 308 aa27.2■■□□□ 1.94
SNHG6-205ENST00000521399 NUDCQ9Y266 331 aa27.2■■□□□ 1.94
SNHG6-205ENST00000521399 PRELPP51888 382 aa27.19■■□□□ 1.94
SNHG6-205ENST00000521399 BRIP1Q9BX63 1249 aa27.19■■□□□ 1.94
SNHG6-205ENST00000521399 PDZRN3Q9UPQ7 1066 aa27.19■■□□□ 1.94
SNHG6-205ENST00000521399 CCDC88AQ3V6T2 1871 aa27.19■■□□□ 1.94
SNHG6-205ENST00000521399 NPM2Q86SE8 214 aaKnown RBP27.18■■□□□ 1.94
SNHG6-205ENST00000521399 WDR90Q96KV7 1748 aa27.17■■□□□ 1.94
SNHG6-205ENST00000521399 PDE6BP35913 854 aa27.17■■□□□ 1.94
SNHG6-205ENST00000521399 PRR5LQ6MZQ0 368 aa27.17■■□□□ 1.94
SNHG6-205ENST00000521399 CAMTA2O94983 1202 aa27.16■■□□□ 1.94
SNHG6-205ENST00000521399 U2AF1L5P0DN76 240 aaPredicted RBP27.16■■□□□ 1.94
SNHG6-205ENST00000521399 PPP2R1AP30153 589 aa27.16■■□□□ 1.94
SNHG6-205ENST00000521399 U2AF1Q01081 240 aaKnown RBP eCLIP27.16■■□□□ 1.94
SNHG6-205ENST00000521399 NFKBIEO00221 500 aa27.15■■□□□ 1.94
SNHG6-205ENST00000521399 CCDC24Q8N4L8 307 aa27.15■■□□□ 1.94
SNHG6-205ENST00000521399 ZNF622Q969S3 477 aaKnown RBP eCLIP27.15■■□□□ 1.943e-21■□□□□ 9.3
SNHG6-205ENST00000521399 SETDB2Q96T68 719 aa27.15■■□□□ 1.94
SNHG6-205ENST00000521399 GLTPD2A6NH11 291 aa27.14■■□□□ 1.94
SNHG6-205ENST00000521399 RTF1Q92541 710 aaKnown RBP27.14■■□□□ 1.94
SNHG6-205ENST00000521399 USP16Q9Y5T5 823 aa27.14■■□□□ 1.94
SNHG6-205ENST00000521399 MCM10Q7L590 875 aa27.13■■□□□ 1.93
SNHG6-205ENST00000521399 COL11A2P13942 1736 aaPredicted RBP27.13■■□□□ 1.93
SNHG6-205ENST00000521399 BCORQ6W2J9 1755 aa27.12■■□□□ 1.93
SNHG6-205ENST00000521399 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
SNHG6-205ENST00000521399 CNBD1Q8NA66 436 aa27.12■■□□□ 1.93
SNHG6-205ENST00000521399 TIAM2Q8IVF5 1701 aa27.12■■□□□ 1.93
SNHG6-205ENST00000521399 PRAMEF22A3QJZ6 481 aa27.11■■□□□ 1.93
SNHG6-205ENST00000521399 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
SNHG6-205ENST00000521399 SMC1BQ8NDV3 1235 aa27.11■■□□□ 1.93
SNHG6-205ENST00000521399 C21orf2O43822 256 aa27.1■■□□□ 1.93
SNHG6-205ENST00000521399 VEGFAP15692 232 aaPredicted RBP27.1■■□□□ 1.93
SNHG6-205ENST00000521399 HTRA3P83110 453 aa27.1■■□□□ 1.93
SNHG6-205ENST00000521399 FER1L6Q2WGJ9 1857 aa27.09■■□□□ 1.93
SNHG6-205ENST00000521399 NPHP1O15259 732 aa27.09■■□□□ 1.93
SNHG6-205ENST00000521399 PIP4K2AP48426 406 aaPredicted RBP27.09■■□□□ 1.93
SNHG6-205ENST00000521399 HTATSF1O43719 755 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms