RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ERCC3P19447 782 aa5.93□□□□□ -1.46
HMGN1P28-201ENST00000521340 ZNF211Q13398 564 aaPredicted RBP5.93□□□□□ -1.46
HMGN1P28-201ENST00000521340 MTFR1Q15390 333 aa5.93□□□□□ -1.46
HMGN1P28-201ENST00000521340 TNS4Q8IZW8 715 aa5.93□□□□□ -1.46
HMGN1P28-201ENST00000521340 ZNF784Q8NCA9 323 aaPredicted RBP5.93□□□□□ -1.46
HMGN1P28-201ENST00000521340 A0A1W2PRU2 124 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 FAM181BA6NEQ2 426 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 FIGNL2A6NMB9 653 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 IGHA2P01877 340 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 GDF10P55107 478 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 MARSP56192 900 aaKnown RBP5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 RAB15P59190 212 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 FKBP4Q02790 459 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 PSME1Q06323 249 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 MTMR3Q13615 1198 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 FBXO33Q7Z6M2 555 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 GPR161Q8N6U8 529 aaKnown RBP5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 XAGE2Q96GT9 111 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 HINFPQ9BQA5 517 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 SAP130Q9H0E3 1048 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 ANO2Q9NQ90 1003 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 IQSEC3Q9UPP2 1182 aaPredicted RBP5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 USP3Q9Y6I4 520 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 ATAD2Q6PL18 1390 aa5.92□□□□□ -1.46
HMGN1P28-201ENST00000521340 TTLL8A6PVC2 850 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 E9PSI1 815 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 SPINT1O43278 529 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 FOXO3O43524 673 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 MYCP01106 439 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 ZNF16P17020 682 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 KRT76Q01546 638 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 STAG2Q8N3U4 1231 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 AGBL1Q96MI9 1066 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 TSPAN10Q9H1Z9 355 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 CYLDQ9NQC7 956 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 SCHIP1Q9P0W5 487 aaPredicted RBP5.91□□□□□ -1.46
HMGN1P28-201ENST00000521340 ANKRD33BA6NCL7 494 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 TNFRSF10BO14763 440 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 GNRH1P01148 92 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 IL2RAP01589 272 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 TAGLNQ01995 201 aaKnown RBP5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 PTSQ03393 145 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 FAM26DQ5JW98 314 aa5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 C2orf49Q9BVC5 232 aaPredicted RBP5.9□□□□□ -1.46
HMGN1P28-201ENST00000521340 PTCD1O75127 700 aaKnown RBP5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 DHX9Q08211 1270 aaKnown RBP5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 SF3B2Q13435 895 aaKnown RBP5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 HELQQ8TDG4 1101 aa5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 ASB16Q96NS5 453 aa5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 MKNK1Q9BUB5 465 aa5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 FHDC1Q9C0D6 1143 aaPredicted RBP5.89□□□□□ -1.47
HMGN1P28-201ENST00000521340 H3BRB1 525 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 BACH1O14867 736 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 ABL1P00519 1130 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 CTSOP43234 321 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 SMTNP53814 917 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 NAA30Q147X3 362 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 C7orf43Q8WVR3 580 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 TUT1Q9H6E5 874 aaKnown RBP5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 SERTAD1Q9UHV2 236 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 LRFN2Q9ULH4 789 aa5.88□□□□□ -1.47
HMGN1P28-201ENST00000521340 SLC35F4A4IF30 521 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 A6NJY4 79 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 CDK2AP1O14519 115 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 RELBQ01201 579 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 COX20Q5RI15 118 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 CCDC155Q8N6L0 562 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 ZDHHC1Q8WTX9 485 aa5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 INSM2Q96T92 566 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 RBM19Q9Y4C8 960 aaKnown RBP5.87□□□□□ -1.47
HMGN1P28-201ENST00000521340 ZBTB39O15060 712 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 HIRAP54198 1017 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 COL19A1Q14993 1142 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 TBCELQ5QJ74 424 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 CYP2U1Q7Z449 544 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 NANOS1Q8WY41 292 aaKnown RBP5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 MYO19Q96H55 970 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 CNTNAP3BQ96NU0 1288 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 CNTNAP3Q9BZ76 1288 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 ZNF395Q9H8N7 513 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 QTRT2Q9H974 415 aaKnown RBP5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 DCTN4Q9UJW0 460 aa5.86□□□□□ -1.47
HMGN1P28-201ENST00000521340 EML1O00423 815 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 FZD6O60353 706 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 VAMP1P23763 118 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 GSK3AP49840 483 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 DSC3Q14574 896 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 RNFT1Q5M7Z0 435 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 SH3PXD2AQ5TCZ1 1133 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 SLC9A9Q8IVB4 645 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 GLYCTKQ8IVS8 523 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 RGL4Q8IZJ4 473 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 ESYT1Q9BSJ8 1104 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 RBCK1Q9BYM8 510 aa5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 BIN2Q9UBW5 565 aaPredicted RBP5.85□□□□□ -1.47
HMGN1P28-201ENST00000521340 ADH1AP07327 375 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms