RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 RASSF7Q02833 373 aa18.43■□□□□ 0.54
SPARC-203ENST00000521327 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
SPARC-203ENST00000521327 SERPINB2P05120 415 aa18.42■□□□□ 0.54
SPARC-203ENST00000521327 LMNB1P20700 586 aa18.41■□□□□ 0.54
SPARC-203ENST00000521327 MTHFSDQ2M296 383 aaKnown RBP18.41■□□□□ 0.54
SPARC-203ENST00000521327 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
SPARC-203ENST00000521327 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
SPARC-203ENST00000521327 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
SPARC-203ENST00000521327 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
SPARC-203ENST00000521327 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
SPARC-203ENST00000521327 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
SPARC-203ENST00000521327 JMYQ8N9B5 988 aa18.4■□□□□ 0.54
SPARC-203ENST00000521327 COL15A1P39059 1388 aa18.4■□□□□ 0.54
SPARC-203ENST00000521327 PRELPP51888 382 aa18.39■□□□□ 0.53
SPARC-203ENST00000521327 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
SPARC-203ENST00000521327 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
SPARC-203ENST00000521327 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
SPARC-203ENST00000521327 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.53
SPARC-203ENST00000521327 TJP1Q07157 1748 aa18.38■□□□□ 0.53
SPARC-203ENST00000521327 GLTPD2A6NH11 291 aa18.38■□□□□ 0.53
SPARC-203ENST00000521327 H0YIN7 160 aa18.38■□□□□ 0.53
SPARC-203ENST00000521327 VEGFAP15692 232 aaPredicted RBP18.38■□□□□ 0.53
SPARC-203ENST00000521327 ZC3H4Q9UPT8 1303 aaKnown RBP18.38■□□□□ 0.53
SPARC-203ENST00000521327 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
SPARC-203ENST00000521327 STARD3NLO95772 234 aa18.36■□□□□ 0.53
SPARC-203ENST00000521327 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
SPARC-203ENST00000521327 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
SPARC-203ENST00000521327 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
SPARC-203ENST00000521327 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SPARC-203ENST00000521327 A0A087WZG4 1122 aa18.34■□□□□ 0.53
SPARC-203ENST00000521327 NFKBIEO00221 500 aa18.34■□□□□ 0.53
SPARC-203ENST00000521327 MRC1P22897 1456 aa18.33■□□□□ 0.53
SPARC-203ENST00000521327 PCNTO95613 3336 aa18.33■□□□□ 0.53
SPARC-203ENST00000521327 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
SPARC-203ENST00000521327 WDR90Q96KV7 1748 aa18.33■□□□□ 0.52
SPARC-203ENST00000521327 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
SPARC-203ENST00000521327 TBC1D9BQ66K14 1250 aa18.33■□□□□ 0.52
SPARC-203ENST00000521327 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
SPARC-203ENST00000521327 ZNF622Q969S3 477 aaKnown RBP eCLIP18.33■□□□□ 0.52
SPARC-203ENST00000521327 ZNF496Q96IT1 587 aaPredicted RBP18.33■□□□□ 0.52
SPARC-203ENST00000521327 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
SPARC-203ENST00000521327 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.52
SPARC-203ENST00000521327 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
SPARC-203ENST00000521327 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 C21orf2O43822 256 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 DPY19L2Q6NUT2 758 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
SPARC-203ENST00000521327 POTECB2RU33 542 aa18.3■□□□□ 0.52
SPARC-203ENST00000521327 PER1O15534 1290 aaPredicted RBP18.3■□□□□ 0.52
SPARC-203ENST00000521327 CAPN15O75808 1086 aa18.3■□□□□ 0.52
SPARC-203ENST00000521327 PDE6BP35913 854 aa18.3■□□□□ 0.52
SPARC-203ENST00000521327 TEFQ10587 303 aa18.3■□□□□ 0.52
SPARC-203ENST00000521327 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
SPARC-203ENST00000521327 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
SPARC-203ENST00000521327 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
SPARC-203ENST00000521327 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
SPARC-203ENST00000521327 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
SPARC-203ENST00000521327 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
SPARC-203ENST00000521327 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
SPARC-203ENST00000521327 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
SPARC-203ENST00000521327 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
SPARC-203ENST00000521327 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
SPARC-203ENST00000521327 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
SPARC-203ENST00000521327 A1BGP04217 495 aa18.27■□□□□ 0.52
SPARC-203ENST00000521327 IL6STP40189 918 aaPredicted RBP18.27■□□□□ 0.52
SPARC-203ENST00000521327 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
SPARC-203ENST00000521327 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.52
SPARC-203ENST00000521327 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
SPARC-203ENST00000521327 NPHP1O15259 732 aa18.26■□□□□ 0.51
SPARC-203ENST00000521327 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
SPARC-203ENST00000521327 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
SPARC-203ENST00000521327 SBF1O95248 1867 aa18.26■□□□□ 0.51
SPARC-203ENST00000521327 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
SPARC-203ENST00000521327 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
SPARC-203ENST00000521327 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
SPARC-203ENST00000521327 NRXN2Q9P2S2 1712 aa18.25■□□□□ 0.51
SPARC-203ENST00000521327 KCNQ3O43525 872 aa18.24■□□□□ 0.51
SPARC-203ENST00000521327 CAMTA2O94983 1202 aa18.24■□□□□ 0.51
SPARC-203ENST00000521327 CNKSR1Q969H4 720 aa18.24■□□□□ 0.51
SPARC-203ENST00000521327 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
SPARC-203ENST00000521327 AFDNP55196 1824 aaKnown RBP18.23■□□□□ 0.51
SPARC-203ENST00000521327 BTBD11A6QL63 1104 aa18.22■□□□□ 0.51
SPARC-203ENST00000521327 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
SPARC-203ENST00000521327 SRGNP10124 158 aa18.22■□□□□ 0.51
SPARC-203ENST00000521327 ST5P78524 1137 aa18.22■□□□□ 0.51
SPARC-203ENST00000521327 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
SPARC-203ENST00000521327 STYK1Q6J9G0 422 aa18.21■□□□□ 0.51
SPARC-203ENST00000521327 CHADLQ6NUI6 762 aa18.21■□□□□ 0.51
SPARC-203ENST00000521327 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.51
SPARC-203ENST00000521327 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
SPARC-203ENST00000521327 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
SPARC-203ENST00000521327 LTBP3Q9NS15 1303 aa18.21■□□□□ 0.51
SPARC-203ENST00000521327 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
SPARC-203ENST00000521327 POTEJP0CG39 1038 aa18.2■□□□□ 0.5
SPARC-203ENST00000521327 MASTLQ96GX5 879 aa18.2■□□□□ 0.5
SPARC-203ENST00000521327 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
SPARC-203ENST00000521327 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
SPARC-203ENST00000521327 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms