RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 IP6K1Q92551 441 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 HHIPL1Q96JK4 782 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 BRCA2P51587 3418 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
PVT1-210ENST00000521122 INSRP06213 1382 aa12.83□□□□□ -0.36
PVT1-210ENST00000521122 FKBP8Q14318 412 aa12.83□□□□□ -0.36
PVT1-210ENST00000521122 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
PVT1-210ENST00000521122 SAPCD2Q86UD0 394 aa12.83□□□□□ -0.36
PVT1-210ENST00000521122 SAGE1Q9NXZ1 904 aa12.83□□□□□ -0.36
PVT1-210ENST00000521122 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
PVT1-210ENST00000521122 VCANP13611 3396 aa12.81□□□□□ -0.36
PVT1-210ENST00000521122 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
PVT1-210ENST00000521122 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
PVT1-210ENST00000521122 RGPD2P0DJD1 1756 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 TM4SF1P30408 202 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 NOGQ13253 232 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 PKN2Q16513 984 aaKnown RBP12.8□□□□□ -0.36
PVT1-210ENST00000521122 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
PVT1-210ENST00000521122 CYP27B1O15528 508 aa12.79□□□□□ -0.36
PVT1-210ENST00000521122 C21orf2O43822 256 aa12.79□□□□□ -0.36
PVT1-210ENST00000521122 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
PVT1-210ENST00000521122 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
PVT1-210ENST00000521122 SRP68Q9UHB9 627 aaKnown RBP12.79□□□□□ -0.36
PVT1-210ENST00000521122 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
PVT1-210ENST00000521122 CNTNAP4Q9C0A0 1308 aa12.79□□□□□ -0.36
PVT1-210ENST00000521122 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
PVT1-210ENST00000521122 TRAF5O00463 557 aa12.78□□□□□ -0.36
PVT1-210ENST00000521122 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
PVT1-210ENST00000521122 RAPGEF4Q8WZA2 1011 aa12.78□□□□□ -0.36
PVT1-210ENST00000521122 ZIC5Q96T25 663 aa12.78□□□□□ -0.36
PVT1-210ENST00000521122 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
PVT1-210ENST00000521122 KTN1Q86UP2 1357 aaKnown RBP12.78□□□□□ -0.36
PVT1-210ENST00000521122 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.37
PVT1-210ENST00000521122 H0YIN7 160 aa12.77□□□□□ -0.37
PVT1-210ENST00000521122 KDRP35968 1356 aa12.77□□□□□ -0.37
PVT1-210ENST00000521122 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
PVT1-210ENST00000521122 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
PVT1-210ENST00000521122 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
PVT1-210ENST00000521122 DCAF11Q8TEB1 546 aa12.76□□□□□ -0.37
PVT1-210ENST00000521122 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
PVT1-210ENST00000521122 CENPJQ9HC77 1338 aaPredicted RBP12.76□□□□□ -0.37
PVT1-210ENST00000521122 ZNF831Q5JPB2 1677 aa12.76□□□□□ -0.37
PVT1-210ENST00000521122 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
PVT1-210ENST00000521122 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
PVT1-210ENST00000521122 NME9Q86XW9 330 aa12.75□□□□□ -0.37
PVT1-210ENST00000521122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
PVT1-210ENST00000521122 HTTP42858 3142 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 TRPA1O75762 1119 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 CELF2O95319 508 aaKnown RBP12.74□□□□□ -0.37
PVT1-210ENST00000521122 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
PVT1-210ENST00000521122 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 ATG3Q9NT62 314 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
PVT1-210ENST00000521122 CENPFP49454 3210 aa12.74□□□□□ -0.37
PVT1-210ENST00000521122 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
PVT1-210ENST00000521122 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
PVT1-210ENST00000521122 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
PVT1-210ENST00000521122 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
PVT1-210ENST00000521122 HOXC9P31274 260 aa12.72□□□□□ -0.37
PVT1-210ENST00000521122 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
PVT1-210ENST00000521122 AKAP11Q9UKA4 1901 aa12.71□□□□□ -0.37
PVT1-210ENST00000521122 BICDL1Q6ZP65 573 aa12.71□□□□□ -0.37
PVT1-210ENST00000521122 GPC2Q8N158 579 aa12.71□□□□□ -0.37
PVT1-210ENST00000521122 ZNF622Q969S3 477 aaKnown RBP eCLIP12.71□□□□□ -0.37
PVT1-210ENST00000521122 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
PVT1-210ENST00000521122 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
PVT1-210ENST00000521122 FBXO46Q6PJ61 603 aaPredicted RBP12.7□□□□□ -0.38
PVT1-210ENST00000521122 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
PVT1-210ENST00000521122 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 SERPINB2P05120 415 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 NFIXQ14938 502 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PVT1-210ENST00000521122 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 SBNO2Q9Y2G9 1366 aa12.68□□□□□ -0.38
PVT1-210ENST00000521122 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
PVT1-210ENST00000521122 FZD9O00144 591 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
PVT1-210ENST00000521122 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
PVT1-210ENST00000521122 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 CACNA1AO00555 2505 aa12.67□□□□□ -0.38
PVT1-210ENST00000521122 ZPR1O75312 459 aa12.66□□□□□ -0.38
PVT1-210ENST00000521122 COL9A1P20849 921 aa12.66□□□□□ -0.38
PVT1-210ENST00000521122 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
PVT1-210ENST00000521122 AMPHP49418 695 aa12.66□□□□□ -0.38
PVT1-210ENST00000521122 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
PVT1-210ENST00000521122 SLX4Q8IY92 1834 aa12.66□□□□□ -0.38
PVT1-210ENST00000521122 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms