RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
SREK1-209ENST00000520953 RGS12O14924 1447 aa19.24■□□□□ 0.67
SREK1-209ENST00000520953 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
SREK1-209ENST00000520953 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
SREK1-209ENST00000520953 KRT27Q7Z3Y8 459 aa19.24■□□□□ 0.67
SREK1-209ENST00000520953 SBF2Q86WG5 1849 aa19.23■□□□□ 0.67
SREK1-209ENST00000520953 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
SREK1-209ENST00000520953 PDIA6Q15084 440 aa19.23■□□□□ 0.67
SREK1-209ENST00000520953 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
SREK1-209ENST00000520953 PPP4R2Q9NY27 417 aa19.23■□□□□ 0.67
SREK1-209ENST00000520953 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
SREK1-209ENST00000520953 DNAJC10Q8IXB1 793 aa19.22■□□□□ 0.67
SREK1-209ENST00000520953 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
SREK1-209ENST00000520953 BTAF1O14981 1849 aa19.21■□□□□ 0.67
SREK1-209ENST00000520953 LAMB4A4D0S4 1761 aa19.21■□□□□ 0.67
SREK1-209ENST00000520953 F6X3S4 739 aa19.2■□□□□ 0.66
SREK1-209ENST00000520953 KCNQ4P56696 695 aa19.2■□□□□ 0.66
SREK1-209ENST00000520953 A1BGP04217 495 aa19.2■□□□□ 0.66
SREK1-209ENST00000520953 MYL6BP14649 208 aa19.2■□□□□ 0.66
SREK1-209ENST00000520953 FLIIQ13045 1269 aa19.2■□□□□ 0.66
SREK1-209ENST00000520953 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
SREK1-209ENST00000520953 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 NBPF26B4DH59 902 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 PDE3AQ14432 1141 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 NBPF14Q5TI25 921 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 NBPF10Q6P3W6 841 aaKnown RBP19.19■□□□□ 0.66
SREK1-209ENST00000520953 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 NBPF15Q8N660 670 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 FTSJ3Q8IY81 847 aaKnown RBP19.19■□□□□ 0.66
SREK1-209ENST00000520953 TJP1Q07157 1748 aa19.19■□□□□ 0.66
SREK1-209ENST00000520953 IPO8O15397 1037 aaKnown RBP19.18■□□□□ 0.66
SREK1-209ENST00000520953 DBF4Q9UBU7 674 aaPredicted RBP19.18■□□□□ 0.66
SREK1-209ENST00000520953 LRP10Q7Z4F1 713 aa19.17■□□□□ 0.66
SREK1-209ENST00000520953 FKBP5Q13451 457 aaPredicted RBP19.17■□□□□ 0.66
SREK1-209ENST00000520953 ITPK1Q13572 414 aa19.17■□□□□ 0.66
SREK1-209ENST00000520953 ARHGAP45Q92619 1136 aa19.17■□□□□ 0.66
SREK1-209ENST00000520953 LOC102724428A0A0B4J2F2 783 aa19.16■□□□□ 0.66
SREK1-209ENST00000520953 TRIM37O94972 964 aa19.16■□□□□ 0.66
SREK1-209ENST00000520953 SIK1P57059 783 aa19.16■□□□□ 0.66
SREK1-209ENST00000520953 DDX21Q9NR30 783 aaKnown RBP eCLIP19.16■□□□□ 0.66
SREK1-209ENST00000520953 ABCC4O15439 1325 aa19.16■□□□□ 0.66
SREK1-209ENST00000520953 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
SREK1-209ENST00000520953 AIMP1Q12904 312 aaKnown RBP19.16■□□□□ 0.66
SREK1-209ENST00000520953 PTPRCP08575 1304 aa19.15■□□□□ 0.66
SREK1-209ENST00000520953 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
SREK1-209ENST00000520953 FAM196AQ6ZSG2 479 aa19.15■□□□□ 0.66
SREK1-209ENST00000520953 ITPRIPQ8IWB1 547 aa19.15■□□□□ 0.66
SREK1-209ENST00000520953 VSIG10Q8N0Z9 540 aa19.15■□□□□ 0.66
SREK1-209ENST00000520953 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
SREK1-209ENST00000520953 CYP19A1P11511 503 aaPredicted RBP19.14■□□□□ 0.65
SREK1-209ENST00000520953 MVPQ14764 893 aaKnown RBP19.13■□□□□ 0.65
SREK1-209ENST00000520953 XAGE3Q8WTP9 111 aa19.13■□□□□ 0.65
SREK1-209ENST00000520953 ADCY9O60503 1353 aa19.13■□□□□ 0.65
SREK1-209ENST00000520953 B4GALNT3Q6L9W6 998 aa19.13■□□□□ 0.65
SREK1-209ENST00000520953 SLC4A10Q6U841 1118 aa19.13■□□□□ 0.65
SREK1-209ENST00000520953 BCL11BQ9C0K0 894 aaPredicted RBP19.13■□□□□ 0.65
SREK1-209ENST00000520953 COPS6Q7L5N1 327 aa19.12■□□□□ 0.65
SREK1-209ENST00000520953 HYPKQ9NX55 129 aa19.12■□□□□ 0.65
SREK1-209ENST00000520953 PI4KAP2A4QPH2 592 aa19.12■□□□□ 0.65
SREK1-209ENST00000520953 PI4KAP1Q8N8J0 262 aa19.12■□□□□ 0.65
SREK1-209ENST00000520953 SMARCC1Q92922 1105 aaPredicted RBP19.12■□□□□ 0.65
SREK1-209ENST00000520953 ZBTB1Q9Y2K1 713 aa19.11■□□□□ 0.65
SREK1-209ENST00000520953 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
SREK1-209ENST00000520953 TTLL7Q6ZT98 887 aa19.1■□□□□ 0.65
SREK1-209ENST00000520953 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
SREK1-209ENST00000520953 LINC00116Q8NCU8 138 aa19.1■□□□□ 0.65
SREK1-209ENST00000520953 STARD3NLO95772 234 aa19.09■□□□□ 0.65
SREK1-209ENST00000520953 SMIM5Q71RC9 77 aa19.09■□□□□ 0.65
SREK1-209ENST00000520953 TEX13AQ9BXU3 409 aaPredicted RBP19.09■□□□□ 0.65
SREK1-209ENST00000520953 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
SREK1-209ENST00000520953 MAP3K2Q9Y2U5 619 aa19.09■□□□□ 0.65
SREK1-209ENST00000520953 LY75O60449 1722 aa19.08■□□□□ 0.65
SREK1-209ENST00000520953 MS4A1P11836 297 aa19.08■□□□□ 0.65
SREK1-209ENST00000520953 INTS5Q6P9B9 1019 aaKnown RBP19.08■□□□□ 0.65
SREK1-209ENST00000520953 COL5A3P25940 1745 aaPredicted RBP19.08■□□□□ 0.64
SREK1-209ENST00000520953 CRKLP46109 303 aaKnown RBP19.08■□□□□ 0.64
SREK1-209ENST00000520953 INTS3Q68E01 1043 aaKnown RBP19.08■□□□□ 0.64
SREK1-209ENST00000520953 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
SREK1-209ENST00000520953 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
SREK1-209ENST00000520953 DNAAF4Q8WXU2 420 aa19.06■□□□□ 0.64
SREK1-209ENST00000520953 C1orf115Q9H7X2 142 aa19.06■□□□□ 0.64
SREK1-209ENST00000520953 LRRC4BQ9NT99 713 aa19.06■□□□□ 0.64
SREK1-209ENST00000520953 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
SREK1-209ENST00000520953 ZBTB7BO15156 539 aaPredicted RBP19.06■□□□□ 0.64
SREK1-209ENST00000520953 KSR2Q6VAB6 950 aa19.06■□□□□ 0.64
SREK1-209ENST00000520953 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
SREK1-209ENST00000520953 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
SREK1-209ENST00000520953 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 MEIS3Q99687 375 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 ZBTB3Q9H5J0 574 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
SREK1-209ENST00000520953 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
SREK1-209ENST00000520953 AMIGO3Q86WK7 504 aa19.03■□□□□ 0.64
SREK1-209ENST00000520953 ZBTB40Q9NUA8 1239 aa19.03■□□□□ 0.64
SREK1-209ENST00000520953 ARFGEF2Q9Y6D5 1785 aa19.03■□□□□ 0.64
SREK1-209ENST00000520953 RREB1Q92766 1687 aa19.03■□□□□ 0.64
SREK1-209ENST00000520953 PROM2Q8N271 834 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms