RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 BRCA1P38398 1863 aaKnown RBP12.36□□□□□ -0.43
CDH17-204ENST00000520952 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
CDH17-204ENST00000520952 NFIXQ14938 502 aa12.36□□□□□ -0.43
CDH17-204ENST00000520952 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
CDH17-204ENST00000520952 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
CDH17-204ENST00000520952 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
CDH17-204ENST00000520952 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
CDH17-204ENST00000520952 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
CDH17-204ENST00000520952 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
CDH17-204ENST00000520952 VIRMAQ69YN4 1812 aaKnown RBP12.33□□□□□ -0.44
CDH17-204ENST00000520952 TOMM70O94826 608 aa12.33□□□□□ -0.44
CDH17-204ENST00000520952 SERPINB2P05120 415 aa12.33□□□□□ -0.44
CDH17-204ENST00000520952 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
CDH17-204ENST00000520952 RNF181Q9P0P0 153 aa12.33□□□□□ -0.44
CDH17-204ENST00000520952 COL15A1P39059 1388 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 PRELPP51888 382 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
CDH17-204ENST00000520952 MRC1P22897 1456 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
CDH17-204ENST00000520952 KCNQ3O43525 872 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 EIF5P55010 431 aaKnown RBP12.31□□□□□ -0.44
CDH17-204ENST00000520952 HTRA3P83110 453 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 RASSF7Q02833 373 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
CDH17-204ENST00000520952 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 PHACTR3Q96KR7 559 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 RRAGCQ9HB90 399 aa12.31□□□□□ -0.44
CDH17-204ENST00000520952 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
CDH17-204ENST00000520952 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
CDH17-204ENST00000520952 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 STARD3NLO95772 234 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 APLP1P51693 650 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 TBC1D2BQ9UPU7 963 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
CDH17-204ENST00000520952 A1BGP04217 495 aa12.29□□□□□ -0.44
CDH17-204ENST00000520952 TEFQ10587 303 aa12.29□□□□□ -0.44
CDH17-204ENST00000520952 TBC1D9BQ66K14 1250 aa12.29□□□□□ -0.44
CDH17-204ENST00000520952 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
CDH17-204ENST00000520952 ZNF330Q9Y3S2 320 aaPredicted RBP12.29□□□□□ -0.44
CDH17-204ENST00000520952 SBF1O95248 1867 aa12.29□□□□□ -0.44
CDH17-204ENST00000520952 C16orf71Q8IYS4 520 aaPredicted RBP12.28□□□□□ -0.44
CDH17-204ENST00000520952 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
CDH17-204ENST00000520952 GAS2L2Q8NHY3 880 aa12.28□□□□□ -0.44
CDH17-204ENST00000520952 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
CDH17-204ENST00000520952 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
CDH17-204ENST00000520952 H0YIN7 160 aa12.27□□□□□ -0.45
CDH17-204ENST00000520952 PRKAR2BP31323 418 aa12.27□□□□□ -0.45
CDH17-204ENST00000520952 PIP4K2AP48426 406 aaPredicted RBP12.27□□□□□ -0.45
CDH17-204ENST00000520952 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
CDH17-204ENST00000520952 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
CDH17-204ENST00000520952 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
CDH17-204ENST00000520952 NRXN2Q9P2S2 1712 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 A0A087WZG4 1122 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDH17-204ENST00000520952 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 USP16Q9Y5T5 823 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 PCNTO95613 3336 aa12.26□□□□□ -0.45
CDH17-204ENST00000520952 BTBD11A6QL63 1104 aa12.25□□□□□ -0.45
CDH17-204ENST00000520952 NFKBIEO00221 500 aa12.25□□□□□ -0.45
CDH17-204ENST00000520952 LMNB1P20700 586 aa12.25□□□□□ -0.45
CDH17-204ENST00000520952 PRR5LQ6MZQ0 368 aa12.25□□□□□ -0.45
CDH17-204ENST00000520952 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
CDH17-204ENST00000520952 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
CDH17-204ENST00000520952 C21orf2O43822 256 aa12.24□□□□□ -0.45
CDH17-204ENST00000520952 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
CDH17-204ENST00000520952 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
CDH17-204ENST00000520952 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
CDH17-204ENST00000520952 MCM10Q7L590 875 aa12.24□□□□□ -0.45
CDH17-204ENST00000520952 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
CDH17-204ENST00000520952 CCDC88AQ3V6T2 1871 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
CDH17-204ENST00000520952 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
CDH17-204ENST00000520952 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
CDH17-204ENST00000520952 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH17-204ENST00000520952 FSTL1Q12841 308 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 BRIP1Q9BX63 1249 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 ANKRD31Q8N7Z5 1873 aa12.23□□□□□ -0.45
CDH17-204ENST00000520952 POTECB2RU33 542 aa12.22□□□□□ -0.45
CDH17-204ENST00000520952 PDE6BP35913 854 aa12.22□□□□□ -0.45
CDH17-204ENST00000520952 DZIP3Q86Y13 1208 aaKnown RBP12.22□□□□□ -0.45
CDH17-204ENST00000520952 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
CDH17-204ENST00000520952 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
CDH17-204ENST00000520952 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
CDH17-204ENST00000520952 VEGFAP15692 232 aaPredicted RBP12.21□□□□□ -0.45
CDH17-204ENST00000520952 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CDH17-204ENST00000520952 NUDCQ9Y266 331 aa12.21□□□□□ -0.45
CDH17-204ENST00000520952 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
CDH17-204ENST00000520952 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
CDH17-204ENST00000520952 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
CDH17-204ENST00000520952 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
CDH17-204ENST00000520952 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms