RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-224ENST00000520522 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
CTNNA1-224ENST00000520522 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
CTNNA1-224ENST00000520522 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.48
CTNNA1-224ENST00000520522 FCHSD2O94868 740 aa12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 KCNA3P22001 575 aa12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 COL15A1P39059 1388 aa12.02□□□□□ -0.49
CTNNA1-224ENST00000520522 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 KIF3CO14782 793 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 ZPR1O75312 459 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 HSPA6P17066 643 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 TM4SF1P30408 202 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
CTNNA1-224ENST00000520522 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
CTNNA1-224ENST00000520522 NARFQ9UHQ1 456 aa12□□□□□ -0.49
CTNNA1-224ENST00000520522 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
CTNNA1-224ENST00000520522 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
CTNNA1-224ENST00000520522 DALRD3Q5D0E6 543 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-224ENST00000520522 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
CTNNA1-224ENST00000520522 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
CTNNA1-224ENST00000520522 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-224ENST00000520522 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
CTNNA1-224ENST00000520522 AFDNP55196 1824 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 GNAT3A8MTJ3 354 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 STARD3NLO95772 234 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 TEFQ10587 303 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 NFIXQ14938 502 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
CTNNA1-224ENST00000520522 HEG1Q9ULI3 1381 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 A0A087WZG4 1122 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 CHRNA5P30532 468 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 ZNF790Q6PG37 636 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 TEX13AQ9BXU3 409 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 DLEC1Q9Y238 1755 aa11.96□□□□□ -0.49
CTNNA1-224ENST00000520522 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
CTNNA1-224ENST00000520522 TOMM70O94826 608 aa11.95□□□□□ -0.5
CTNNA1-224ENST00000520522 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-224ENST00000520522 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
CTNNA1-224ENST00000520522 ZC3H4Q9UPT8 1303 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-224ENST00000520522 SERPINB2P05120 415 aa11.94□□□□□ -0.5
CTNNA1-224ENST00000520522 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-224ENST00000520522 SBF1O95248 1867 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 NMRK2Q9NPI5 230 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 RNF181Q9P0P0 153 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
CTNNA1-224ENST00000520522 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 TNRC6CQ9HCJ0 1690 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 PRKAR2BP31323 418 aa11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 APLP1P51693 650 aa11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
CTNNA1-224ENST00000520522 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
CTNNA1-224ENST00000520522 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
CTNNA1-224ENST00000520522 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
CTNNA1-224ENST00000520522 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 H0YIN7 160 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 RASSF7Q02833 373 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.5
CTNNA1-224ENST00000520522 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 LMNB1P20700 586 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 PDE6BP35913 854 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 FSTL1Q12841 308 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
CTNNA1-224ENST00000520522 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 A1BGP04217 495 aa11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-224ENST00000520522 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 NFKBIEO00221 500 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 RGL2O15211 777 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 KCNQ3O43525 872 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
CTNNA1-224ENST00000520522 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms