RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	MPRIP	Q6WCQ1	1025 aa		10.93	□□□□□ -0.66
CTNNA1-223	ENST00000520520	ZNF526	Q8TF50	670 aa	Predicted RBP	10.93	□□□□□ -0.66
CTNNA1-223	ENST00000520520	NFKBIB	Q15653	356 aa		10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	HSP90AB2P	Q58FF8	381 aa		10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	SMIM5	Q71RC9	77 aa		10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	CARD14	Q9BXL6	1004 aa		10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	PNN	Q9H307	717 aa	Known RBP	10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	C5	P01031	1676 aa		10.92	□□□□□ -0.66
CTNNA1-223	ENST00000520520	RWDD1	Q9H446	243 aa	Predicted RBP	10.91	□□□□□ -0.66
CTNNA1-223	ENST00000520520	PALLD	Q8WX93	1383 aa		10.9	□□□□□ -0.66
CTNNA1-223	ENST00000520520	FYB1	O15117	783 aa		10.9	□□□□□ -0.66
CTNNA1-223	ENST00000520520	BCAR3	O75815	825 aa		10.9	□□□□□ -0.66
CTNNA1-223	ENST00000520520	RTN4	Q9NQC3	1192 aa	Known RBP	10.9	□□□□□ -0.66
CTNNA1-223	ENST00000520520	RTL1	A6NKG5	1358 aa		10.9	□□□□□ -0.67
CTNNA1-223	ENST00000520520	PCDH11X	Q9BZA7	1347 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	PCDH11Y	Q9BZA8	1340 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	KIF20B	Q96Q89	1820 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	GRIN3B	O60391	1043 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	AK7	Q96M32	723 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	COL24A1	Q17RW2	1714 aa		10.89	□□□□□ -0.67
CTNNA1-223	ENST00000520520	IL16	Q14005	1332 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	RARS	P54136	660 aa	Known RBP	10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	CHADL	Q6NUI6	762 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	FTSJ3	Q8IY81	847 aa	Known RBP	10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	PIP4P2	Q8N4L2	257 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	CHMP4B	Q9H444	224 aa	Known RBP	10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	ATP10D	Q9P241	1426 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	EMILIN1	Q9Y6C2	1016 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	CEP350	Q5VT06	3117 aa		10.88	□□□□□ -0.67
CTNNA1-223	ENST00000520520	CYP27B1	O15528	508 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	EIF5B	O60841	1220 aa	Known RBP	10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	ZKSCAN2	Q63HK3	967 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	AMIGO3	Q86WK7	504 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	FRAT1	Q92837	279 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	COG6	Q9Y2V7	657 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	FLT4	P35916	1363 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	TOGARAM1	Q9Y4F4	1720 aa		10.87	□□□□□ -0.67
CTNNA1-223	ENST00000520520	TAF1L	Q8IZX4	1826 aa		10.86	□□□□□ -0.67
CTNNA1-223	ENST00000520520	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNNA1-223	ENST00000520520	C4B	P0C0L5	1744 aa		10.86	□□□□□ -0.67
CTNNA1-223	ENST00000520520	ITGB4	P16144	1822 aa		10.86	□□□□□ -0.67
CTNNA1-223	ENST00000520520	KIF16B	Q96L93	1317 aa		10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	TNNT2	P45379	298 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	MTHFS	P49914	203 aa		10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	MVP	Q14764	893 aa	Known RBP	10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	L1TD1	Q5T7N2	865 aa	Known RBP	10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	PANK1	Q8TE04	598 aa		10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	PIGB	Q92521	554 aa		10.85	□□□□□ -0.67
CTNNA1-223	ENST00000520520	IGSF1	Q8N6C5	1336 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	IGHD	P01880	384 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	SKAP1	Q86WV1	359 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	FLAD1	Q8NFF5	587 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	SPOCK2	Q92563	424 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	SMARCC1	Q92922	1105 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	DDX19B	Q9UMR2	479 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	CD2AP	Q9Y5K6	639 aa		10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	COL3A1	P02461	1466 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNNA1-223	ENST00000520520	GNPAT	O15228	680 aa		10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	IPO8	O15397	1037 aa	Known RBP	10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	PRKAR2A	P13861	404 aa	Known RBP	10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	CALD1	Q05682	793 aa	Known RBP	10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	DZIP1L	Q8IYY4	767 aa	Known RBP	10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	LINC00116	Q8NCU8	138 aa		10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	ZNF428	Q96B54	188 aa		10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	TMOD3	Q9NYL9	352 aa		10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	SPG7	Q9UQ90	795 aa		10.83	□□□□□ -0.68
CTNNA1-223	ENST00000520520	LOC102724428	A0A0B4J2F2	783 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	ATP6V1A	P38606	617 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	SIK1	P57059	783 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	TBC1D32	Q96NH3	1257 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	ASAP1	Q9ULH1	1129 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	UBR3	Q6ZT12	1888 aa		10.82	□□□□□ -0.68
CTNNA1-223	ENST00000520520	PKD1L3	Q7Z443	1732 aa		10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	NUBP1	P53384	320 aa		10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	HDAC1	Q13547	482 aa	Predicted RBP	10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	NEUROD2	Q15784	382 aa		10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	SMC4	Q9NTJ3	1288 aa		10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	PDZRN3	Q9UPQ7	1066 aa		10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	RRP7A	Q9Y3A4	280 aa	Known RBP	10.81	□□□□□ -0.68
CTNNA1-223	ENST00000520520	PTMS	P20962	102 aa		10.8	□□□□□ -0.68
CTNNA1-223	ENST00000520520	SLC4A3	P48751	1232 aa		10.8	□□□□□ -0.68
CTNNA1-223	ENST00000520520	ITPK1	Q13572	414 aa		10.8	□□□□□ -0.68
CTNNA1-223	ENST00000520520	CFAP44	Q96MT7	982 aa		10.8	□□□□□ -0.68
CTNNA1-223	ENST00000520520	EYA1	Q99502	592 aa		10.8	□□□□□ -0.68
CTNNA1-223	ENST00000520520	MAP2	P11137	1827 aa	Known RBP	10.79	□□□□□ -0.68
CTNNA1-223	ENST00000520520	MMP10	P09238	476 aa		10.79	□□□□□ -0.68
CTNNA1-223	ENST00000520520	SSFA2	P28290	1259 aa		10.79	□□□□□ -0.68
CTNNA1-223	ENST00000520520	ALDH1L2	Q3SY69	923 aa		10.79	□□□□□ -0.68
CTNNA1-223	ENST00000520520	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.79	□□□□□ -0.68
CTNNA1-223	ENST00000520520	KIF24	Q5T7B8	1368 aa		10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	FRAT2	O75474	233 aa	Predicted RBP	10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	PHKG2	P15735	406 aa		10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	HMGB2	P26583	209 aa	Known RBP	10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	IFFO2	Q5TF58	517 aa		10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	IFNL2	Q8IZJ0	200 aa		10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	BCS1L	Q9Y276	419 aa		10.78	□□□□□ -0.68
CTNNA1-223	ENST00000520520	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.77	□□□□□ -0.68

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