RNA–Protein interactions for RNA: ENST00000520489.5

BIN3-208, Transcript of bridging integrator 3, humanhuman

TSL 2

Gene BIN3, Length 3,589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BIN3-208ENST00000520489 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
BIN3-208ENST00000520489 RAD50Q92878 1312 aa12.9□□□□□ -0.34
BIN3-208ENST00000520489 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
BIN3-208ENST00000520489 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
BIN3-208ENST00000520489 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
BIN3-208ENST00000520489 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
BIN3-208ENST00000520489 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
BIN3-208ENST00000520489 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
BIN3-208ENST00000520489 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
BIN3-208ENST00000520489 KRT24Q2M2I5 525 aa12.89□□□□□ -0.35
BIN3-208ENST00000520489 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
BIN3-208ENST00000520489 MX1P20591 662 aa12.88□□□□□ -0.35
BIN3-208ENST00000520489 DCTN1Q14203 1278 aa12.88□□□□□ -0.35
BIN3-208ENST00000520489 G2E3Q7L622 706 aa12.88□□□□□ -0.35
BIN3-208ENST00000520489 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
BIN3-208ENST00000520489 LRRCC1Q9C099 1032 aa12.88□□□□□ -0.35
BIN3-208ENST00000520489 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
BIN3-208ENST00000520489 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 TTC41PQ6P2S7 1318 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 TCHHQ07283 1943 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
BIN3-208ENST00000520489 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
BIN3-208ENST00000520489 SGSM2O43147 1006 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
BIN3-208ENST00000520489 EYA1Q99502 592 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 PALD1Q9ULE6 856 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 TJP1Q07157 1748 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 FLIIQ13045 1269 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
BIN3-208ENST00000520489 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
BIN3-208ENST00000520489 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
BIN3-208ENST00000520489 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
BIN3-208ENST00000520489 MCM10Q7L590 875 aa12.85□□□□□ -0.35
BIN3-208ENST00000520489 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
BIN3-208ENST00000520489 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
BIN3-208ENST00000520489 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
BIN3-208ENST00000520489 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
BIN3-208ENST00000520489 LTKP29376 864 aa12.84□□□□□ -0.35
BIN3-208ENST00000520489 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
BIN3-208ENST00000520489 ADCY9O60503 1353 aa12.84□□□□□ -0.35
BIN3-208ENST00000520489 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
BIN3-208ENST00000520489 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
BIN3-208ENST00000520489 IL25Q9H293 177 aa12.84□□□□□ -0.35
BIN3-208ENST00000520489 ELP1O95163 1332 aa12.84□□□□□ -0.35
BIN3-208ENST00000520489 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
BIN3-208ENST00000520489 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
BIN3-208ENST00000520489 HOXC9P31274 260 aa12.83□□□□□ -0.36
BIN3-208ENST00000520489 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
BIN3-208ENST00000520489 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
BIN3-208ENST00000520489 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
BIN3-208ENST00000520489 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
BIN3-208ENST00000520489 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
BIN3-208ENST00000520489 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
BIN3-208ENST00000520489 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
BIN3-208ENST00000520489 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
BIN3-208ENST00000520489 KIAA1211Q6ZU35 1233 aa12.81□□□□□ -0.36
BIN3-208ENST00000520489 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
BIN3-208ENST00000520489 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
BIN3-208ENST00000520489 UNC5CLQ8IV45 518 aa12.81□□□□□ -0.36
BIN3-208ENST00000520489 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
BIN3-208ENST00000520489 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
BIN3-208ENST00000520489 MCCP23508 829 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 ST3GAL1Q11201 340 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
BIN3-208ENST00000520489 TAF7Q15545 349 aaPredicted RBP12.8□□□□□ -0.36
BIN3-208ENST00000520489 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 PIBF1Q8WXW3 757 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 KCND1Q9NSA2 647 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 PHF14O94880 888 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 TSPYL4Q9UJ04 414 aa12.8□□□□□ -0.36
BIN3-208ENST00000520489 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
BIN3-208ENST00000520489 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
BIN3-208ENST00000520489 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 NECTIN1Q15223 517 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 SASS6Q6UVJ0 657 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
BIN3-208ENST00000520489 CCDC183Q5T5S1 534 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
BIN3-208ENST00000520489 FOXO3O43524 673 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 UBE2HP62256 183 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 ZSCAN22P10073 491 aaPredicted RBP12.78□□□□□ -0.36
BIN3-208ENST00000520489 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 PXDNQ92626 1479 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 NEK4P51957 841 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
BIN3-208ENST00000520489 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
BIN3-208ENST00000520489 ALDH1L1O75891 902 aa12.77□□□□□ -0.36
BIN3-208ENST00000520489 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.36
BIN3-208ENST00000520489 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
BIN3-208ENST00000520489 RGPD5Q99666 1765 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms