RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
VPS37A-204ENST00000519381 VSIG10Q8N0Z9 540 aa21.34■■□□□ 1.01
VPS37A-204ENST00000519381 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
VPS37A-204ENST00000519381 ZBTB1Q9Y2K1 713 aa21.33■■□□□ 1.01
VPS37A-204ENST00000519381 NPC1L1Q9UHC9 1359 aa21.33■■□□□ 1
VPS37A-204ENST00000519381 CEP350Q5VT06 3117 aa21.33■■□□□ 1
VPS37A-204ENST00000519381 KIF3CO14782 793 aa21.32■■□□□ 1
VPS37A-204ENST00000519381 CANXP27824 592 aaKnown RBP21.32■■□□□ 1
VPS37A-204ENST00000519381 CHRNA5P30532 468 aa21.32■■□□□ 1
VPS37A-204ENST00000519381 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
VPS37A-204ENST00000519381 NARFQ9UHQ1 456 aa21.32■■□□□ 1
VPS37A-204ENST00000519381 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
VPS37A-204ENST00000519381 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
VPS37A-204ENST00000519381 RNF181Q9P0P0 153 aa21.31■■□□□ 1
VPS37A-204ENST00000519381 ZNF330Q9Y3S2 320 aaPredicted RBP21.31■■□□□ 1
VPS37A-204ENST00000519381 A0A087WZG4 1122 aa21.3■■□□□ 1
VPS37A-204ENST00000519381 KCNA3P22001 575 aa21.3■■□□□ 1
VPS37A-204ENST00000519381 TM4SF1P30408 202 aa21.3■■□□□ 1
VPS37A-204ENST00000519381 UBR2Q8IWV8 1755 aa21.29■■□□□ 1
VPS37A-204ENST00000519381 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
VPS37A-204ENST00000519381 NFIXQ14938 502 aa21.29■■□□□ 1
VPS37A-204ENST00000519381 KDM2BQ8NHM5 1336 aa21.29■■□□□ 1
VPS37A-204ENST00000519381 NPHP1O15259 732 aa21.28■■□□□ 1
VPS37A-204ENST00000519381 TOMM70O94826 608 aa21.28■■□□□ 1
VPS37A-204ENST00000519381 TEX13AQ9BXU3 409 aaPredicted RBP21.28■■□□□ 1
VPS37A-204ENST00000519381 NUDCQ9Y266 331 aa21.28■■□□□ 1
VPS37A-204ENST00000519381 SERPINB2P05120 415 aa21.27■■□□□ 1
VPS37A-204ENST00000519381 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
VPS37A-204ENST00000519381 NMRK2Q9NPI5 230 aa21.27■■□□□ 1
VPS37A-204ENST00000519381 APLP1P51693 650 aa21.26■□□□□ 0.99
VPS37A-204ENST00000519381 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
VPS37A-204ENST00000519381 AFDNP55196 1824 aaKnown RBP21.26■□□□□ 0.99
VPS37A-204ENST00000519381 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
VPS37A-204ENST00000519381 HEG1Q9ULI3 1381 aa21.24■□□□□ 0.99
VPS37A-204ENST00000519381 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
VPS37A-204ENST00000519381 C2CD5Q86YS7 1000 aa21.24■□□□□ 0.99
VPS37A-204ENST00000519381 ZNF496Q96IT1 587 aaPredicted RBP21.24■□□□□ 0.99
VPS37A-204ENST00000519381 H0YIN7 160 aa21.23■□□□□ 0.99
VPS37A-204ENST00000519381 TTLL6Q8N841 843 aa21.23■□□□□ 0.99
VPS37A-204ENST00000519381 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
VPS37A-204ENST00000519381 BTBD11A6QL63 1104 aa21.22■□□□□ 0.99
VPS37A-204ENST00000519381 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
VPS37A-204ENST00000519381 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
VPS37A-204ENST00000519381 U2AF1L5P0DN76 240 aaPredicted RBP21.21■□□□□ 0.99
VPS37A-204ENST00000519381 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
VPS37A-204ENST00000519381 U2AF1Q01081 240 aaKnown RBP eCLIP21.21■□□□□ 0.99
VPS37A-204ENST00000519381 BCL2L12Q9HB09 334 aa21.21■□□□□ 0.99
VPS37A-204ENST00000519381 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
VPS37A-204ENST00000519381 SIPA1L3O60292 1781 aaPredicted RBP21.2■□□□□ 0.99
VPS37A-204ENST00000519381 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.99
VPS37A-204ENST00000519381 RASSF7Q02833 373 aa21.2■□□□□ 0.98
VPS37A-204ENST00000519381 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
VPS37A-204ENST00000519381 TNRC6CQ9HCJ0 1690 aaKnown RBP21.2■□□□□ 0.98
VPS37A-204ENST00000519381 CARMIL3Q8ND23 1372 aa21.2■□□□□ 0.98
VPS37A-204ENST00000519381 NEFMP07197 916 aa21.19■□□□□ 0.98
VPS37A-204ENST00000519381 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
VPS37A-204ENST00000519381 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
VPS37A-204ENST00000519381 TBC1D2BQ9UPU7 963 aa21.19■□□□□ 0.98
VPS37A-204ENST00000519381 LMNB1P20700 586 aa21.18■□□□□ 0.98
VPS37A-204ENST00000519381 PDE6BP35913 854 aa21.18■□□□□ 0.98
VPS37A-204ENST00000519381 TBC1D9BQ66K14 1250 aa21.18■□□□□ 0.98
VPS37A-204ENST00000519381 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
VPS37A-204ENST00000519381 PDZRN3Q9UPQ7 1066 aa21.18■□□□□ 0.98
VPS37A-204ENST00000519381 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
VPS37A-204ENST00000519381 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
VPS37A-204ENST00000519381 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
VPS37A-204ENST00000519381 SBF1O95248 1867 aa21.17■□□□□ 0.98
VPS37A-204ENST00000519381 ST5P78524 1137 aa21.16■□□□□ 0.98
VPS37A-204ENST00000519381 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
VPS37A-204ENST00000519381 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
VPS37A-204ENST00000519381 RRAGCQ9HB90 399 aa21.16■□□□□ 0.98
VPS37A-204ENST00000519381 FSTL1Q12841 308 aa21.15■□□□□ 0.98
VPS37A-204ENST00000519381 DZIP3Q86Y13 1208 aaKnown RBP21.15■□□□□ 0.98
VPS37A-204ENST00000519381 A1BGP04217 495 aa21.14■□□□□ 0.97
VPS37A-204ENST00000519381 BRIP1Q9BX63 1249 aa21.14■□□□□ 0.97
VPS37A-204ENST00000519381 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
VPS37A-204ENST00000519381 ZNF652Q9Y2D9 606 aa21.14■□□□□ 0.97
VPS37A-204ENST00000519381 TIAM2Q8IVF5 1701 aa21.13■□□□□ 0.97
VPS37A-204ENST00000519381 PPP2R1AP30153 589 aa21.13■□□□□ 0.97
VPS37A-204ENST00000519381 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
VPS37A-204ENST00000519381 WDR90Q96KV7 1748 aa21.12■□□□□ 0.97
VPS37A-204ENST00000519381 PRR5LQ6MZQ0 368 aa21.12■□□□□ 0.97
VPS37A-204ENST00000519381 MCM10Q7L590 875 aa21.12■□□□□ 0.97
VPS37A-204ENST00000519381 CCDC24Q8N4L8 307 aa21.12■□□□□ 0.97
VPS37A-204ENST00000519381 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
VPS37A-204ENST00000519381 KCNQ3O43525 872 aa21.11■□□□□ 0.97
VPS37A-204ENST00000519381 SNRPA1P09661 255 aaKnown RBP21.11■□□□□ 0.97
VPS37A-204ENST00000519381 BCORQ6W2J9 1755 aa21.1■□□□□ 0.97
VPS37A-204ENST00000519381 ANKRD31Q8N7Z5 1873 aa21.1■□□□□ 0.97
VPS37A-204ENST00000519381 GLTPD2A6NH11 291 aa21.1■□□□□ 0.97
VPS37A-204ENST00000519381 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
VPS37A-204ENST00000519381 C21orf2O43822 256 aa21.09■□□□□ 0.97
VPS37A-204ENST00000519381 PIP4K2AP48426 406 aaPredicted RBP21.09■□□□□ 0.97
VPS37A-204ENST00000519381 DPY19L2Q6NUT2 758 aa21.09■□□□□ 0.97
VPS37A-204ENST00000519381 NBPF5PQ86XG9 351 aaPredicted RBP21.09■□□□□ 0.97
VPS37A-204ENST00000519381 CNKSR1Q969H4 720 aa21.09■□□□□ 0.97
VPS37A-204ENST00000519381 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
VPS37A-204ENST00000519381 VEGFAP15692 232 aaPredicted RBP21.08■□□□□ 0.97
VPS37A-204ENST00000519381 CCDC88AQ3V6T2 1871 aa21.08■□□□□ 0.97
VPS37A-204ENST00000519381 SOGA3Q5TF21 947 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms