RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 DDX19BQ9UMR2 479 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
CLN8-204ENST00000519254 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
CLN8-204ENST00000519254 KCNQ2O43526 872 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 HOXB7P09629 217 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 RXRBP28702 533 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
CLN8-204ENST00000519254 CACNA1FO60840 1977 aa18.36■□□□□ 0.53
CLN8-204ENST00000519254 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
CLN8-204ENST00000519254 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
CLN8-204ENST00000519254 POTEAQ6S8J7 498 aa18.35■□□□□ 0.53
CLN8-204ENST00000519254 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
CLN8-204ENST00000519254 ABCC4O15439 1325 aa18.35■□□□□ 0.53
CLN8-204ENST00000519254 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
CLN8-204ENST00000519254 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
CLN8-204ENST00000519254 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
CLN8-204ENST00000519254 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.53
CLN8-204ENST00000519254 ANXA1P04083 346 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 G2E3Q7L622 706 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 USP16Q9Y5T5 823 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 RGS12O14924 1447 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
CLN8-204ENST00000519254 ZBTB7BO15156 539 aaPredicted RBP18.3■□□□□ 0.52
CLN8-204ENST00000519254 RWDD1Q9H446 243 aaPredicted RBP18.3■□□□□ 0.52
CLN8-204ENST00000519254 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
CLN8-204ENST00000519254 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
CLN8-204ENST00000519254 PROSER3Q2NL68 480 aa18.3■□□□□ 0.52
CLN8-204ENST00000519254 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
CLN8-204ENST00000519254 FLIIQ13045 1269 aa18.29■□□□□ 0.52
CLN8-204ENST00000519254 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
CLN8-204ENST00000519254 BTAF1O14981 1849 aa18.29■□□□□ 0.52
CLN8-204ENST00000519254 SBF2Q86WG5 1849 aa18.29■□□□□ 0.52
CLN8-204ENST00000519254 PTPRCP08575 1304 aa18.28■□□□□ 0.52
CLN8-204ENST00000519254 MYL6BP14649 208 aa18.28■□□□□ 0.52
CLN8-204ENST00000519254 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
CLN8-204ENST00000519254 DNAJC10Q8IXB1 793 aa18.28■□□□□ 0.52
CLN8-204ENST00000519254 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
CLN8-204ENST00000519254 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
CLN8-204ENST00000519254 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
CLN8-204ENST00000519254 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.51
CLN8-204ENST00000519254 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.51
CLN8-204ENST00000519254 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.51
CLN8-204ENST00000519254 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLN8-204ENST00000519254 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 SIK1P57059 783 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 PDIA6Q15084 440 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 CHMP4BQ9H444 224 aaKnown RBP18.25■□□□□ 0.51
CLN8-204ENST00000519254 TJP1Q07157 1748 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 F6X3S4 739 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 A1BGP04217 495 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 PDE4AP27815 886 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
CLN8-204ENST00000519254 HYPKQ9NX55 129 aa18.25■□□□□ 0.51
CLN8-204ENST00000519254 TRIM37O94972 964 aa18.24■□□□□ 0.51
CLN8-204ENST00000519254 RGS3P49796 1198 aa18.24■□□□□ 0.51
CLN8-204ENST00000519254 AIMP1Q12904 312 aaKnown RBP18.24■□□□□ 0.51
CLN8-204ENST00000519254 STARD3NLO95772 234 aa18.23■□□□□ 0.51
CLN8-204ENST00000519254 SLC4A10Q6U841 1118 aa18.23■□□□□ 0.51
CLN8-204ENST00000519254 BACH2Q9BYV9 841 aa18.23■□□□□ 0.51
CLN8-204ENST00000519254 BCL11BQ9C0K0 894 aaPredicted RBP18.23■□□□□ 0.51
CLN8-204ENST00000519254 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
CLN8-204ENST00000519254 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
CLN8-204ENST00000519254 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
CLN8-204ENST00000519254 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
CLN8-204ENST00000519254 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
CLN8-204ENST00000519254 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
CLN8-204ENST00000519254 KCNQ4P56696 695 aa18.22■□□□□ 0.51
CLN8-204ENST00000519254 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
CLN8-204ENST00000519254 CYP19A1P11511 503 aaPredicted RBP18.21■□□□□ 0.51
CLN8-204ENST00000519254 ITPK1Q13572 414 aa18.21■□□□□ 0.51
CLN8-204ENST00000519254 XAGE3Q8WTP9 111 aa18.21■□□□□ 0.51
CLN8-204ENST00000519254 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
CLN8-204ENST00000519254 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
CLN8-204ENST00000519254 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
CLN8-204ENST00000519254 SMC5Q8IY18 1101 aa18.19■□□□□ 0.5
CLN8-204ENST00000519254 PI4KAP2A4QPH2 592 aa18.19■□□□□ 0.5
CLN8-204ENST00000519254 LRP10Q7Z4F1 713 aa18.19■□□□□ 0.5
CLN8-204ENST00000519254 PI4KAP1Q8N8J0 262 aa18.19■□□□□ 0.5
CLN8-204ENST00000519254 ADCY9O60503 1353 aa18.18■□□□□ 0.5
CLN8-204ENST00000519254 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
CLN8-204ENST00000519254 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
CLN8-204ENST00000519254 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
CLN8-204ENST00000519254 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
CLN8-204ENST00000519254 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
CLN8-204ENST00000519254 CICQ96RK0 1608 aaPredicted RBP18.17■□□□□ 0.5
CLN8-204ENST00000519254 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
CLN8-204ENST00000519254 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
CLN8-204ENST00000519254 LY75O60449 1722 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms