RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 CT47A1Q5JQC4 288 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-208ENST00000519004 CWC15Q9P013 229 aaKnown RBP16.07■□□□□ 0.16
PABPC1-208ENST00000519004 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 MCCP23508 829 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 CDC25BP30305 580 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 TRPM2O94759 1503 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 CDC42BPBQ9Y5S2 1711 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 SYT1P21579 422 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 CFAP70Q5T0N1 1121 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
PABPC1-208ENST00000519004 ABCA8O94911 1581 aa16.05■□□□□ 0.16
PABPC1-208ENST00000519004 COL3A1P02461 1466 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-208ENST00000519004 ANKRD44Q8N8A2 993 aa16.05■□□□□ 0.16
PABPC1-208ENST00000519004 DNM1Q05193 864 aaKnown RBP16.05■□□□□ 0.16
PABPC1-208ENST00000519004 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
PABPC1-208ENST00000519004 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
PABPC1-208ENST00000519004 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
PABPC1-208ENST00000519004 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 GPS2Q13227 327 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 EP400NLQ6ZTU2 488 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 PACS2Q86VP3 889 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 TRMT1Q9NXH9 659 aaKnown RBP16.04■□□□□ 0.16
PABPC1-208ENST00000519004 ATP6V1DQ9Y5K8 247 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 NEMFO60524 1076 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 GOLGA6L1Q8N7Z2 621 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 IQUBQ8NA54 791 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 NUP62CLQ9H1M0 184 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 KCND1Q9NSA2 647 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
PABPC1-208ENST00000519004 SKILP12757 684 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 CCZ1BP86790 482 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-208ENST00000519004 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
PABPC1-208ENST00000519004 ELP1O95163 1332 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 APBB1O00213 710 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 OAS2P29728 719 aaKnown RBP16.03■□□□□ 0.16
PABPC1-208ENST00000519004 CAMK4Q16566 473 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
PABPC1-208ENST00000519004 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.16
PABPC1-208ENST00000519004 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
PABPC1-208ENST00000519004 OSBPL3Q9H4L5 887 aa16.02■□□□□ 0.16
PABPC1-208ENST00000519004 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.15
PABPC1-208ENST00000519004 LIG1P18858 919 aa16.02■□□□□ 0.15
PABPC1-208ENST00000519004 ATP2B1P20020 1258 aa16.02■□□□□ 0.15
PABPC1-208ENST00000519004 CEP85Q6P2H3 762 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 GPATCH11Q8N954 259 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 CEP83Q9Y592 693 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
PABPC1-208ENST00000519004 SASH3O75995 380 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 CCDC172P0C7W6 258 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
PABPC1-208ENST00000519004 ANO2Q9NQ90 1003 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
PABPC1-208ENST00000519004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16■□□□□ 0.15
PABPC1-208ENST00000519004 MAP3K4Q9Y6R4 1608 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 NSD2O96028 1365 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 ATP8B1O43520 1251 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 SEC31AO94979 1220 aaKnown RBP16■□□□□ 0.15
PABPC1-208ENST00000519004 PDE1AP54750 535 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 SSH2Q76I76 1423 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 ARGLU1Q9NWB6 273 aaPredicted RBP16■□□□□ 0.15
PABPC1-208ENST00000519004 PSD3Q9NYI0 1048 aa16■□□□□ 0.15
PABPC1-208ENST00000519004 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
PABPC1-208ENST00000519004 MAGEA9P43362 315 aa15.99■□□□□ 0.15
PABPC1-208ENST00000519004 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
PABPC1-208ENST00000519004 BCCIPQ9P287 314 aaKnown RBP eCLIP15.99■□□□□ 0.15
PABPC1-208ENST00000519004 ATP10BO94823 1461 aa15.99■□□□□ 0.15
PABPC1-208ENST00000519004 TUBGCP6Q96RT7 1819 aa15.99■□□□□ 0.15
PABPC1-208ENST00000519004 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
PABPC1-208ENST00000519004 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-208ENST00000519004 MTMR6Q9Y217 621 aa15.99■□□□□ 0.15
PABPC1-208ENST00000519004 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
PABPC1-208ENST00000519004 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 SARM1Q6SZW1 724 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 TNMDQ9H2S6 317 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
PABPC1-208ENST00000519004 ZNF165P49910 485 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 SMC1AQ14683 1233 aaKnown RBP15.98■□□□□ 0.15
PABPC1-208ENST00000519004 NOM1Q5C9Z4 860 aaKnown RBP15.98■□□□□ 0.15
PABPC1-208ENST00000519004 TTC6Q86TZ1 520 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 EXOC4Q96A65 974 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
PABPC1-208ENST00000519004 AK7Q96M32 723 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms