RNA–Protein interactions for RNA: ENST00000518789.5

ARFGEF1-205, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-205ENST00000518789 PLSCR1O15162 318 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 MSH5O43196 834 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 APBA3O96018 575 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 API5Q9BZZ5 524 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 PTPRCP08575 1304 aa13.09□□□□□ -0.31
ARFGEF1-205ENST00000518789 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
ARFGEF1-205ENST00000518789 BCAR3O75815 825 aa13.08□□□□□ -0.32
ARFGEF1-205ENST00000518789 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
ARFGEF1-205ENST00000518789 NECTIN2Q92692 538 aa13.08□□□□□ -0.32
ARFGEF1-205ENST00000518789 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
ARFGEF1-205ENST00000518789 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
ARFGEF1-205ENST00000518789 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-205ENST00000518789 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
ARFGEF1-205ENST00000518789 BCL2L13Q9BXK5 485 aa13.07□□□□□ -0.32
ARFGEF1-205ENST00000518789 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-205ENST00000518789 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 RC3H1Q5TC82 1133 aaKnown RBP13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
ARFGEF1-205ENST00000518789 A0A087WZG4 1122 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 BAG6P46379 1132 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 C5P01031 1676 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 LY75O60449 1722 aa13.05□□□□□ -0.32
ARFGEF1-205ENST00000518789 A1BGP04217 495 aa13.04□□□□□ -0.32
ARFGEF1-205ENST00000518789 MYL6BP14649 208 aa13.04□□□□□ -0.32
ARFGEF1-205ENST00000518789 FLIIQ13045 1269 aa13.04□□□□□ -0.32
ARFGEF1-205ENST00000518789 PTF1AQ7RTS3 328 aa13.04□□□□□ -0.32
ARFGEF1-205ENST00000518789 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-205ENST00000518789 CICQ96RK0 1608 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-205ENST00000518789 IL6STP40189 918 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-205ENST00000518789 CRKLP46109 303 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-205ENST00000518789 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
ARFGEF1-205ENST00000518789 PDIA6Q15084 440 aa13.02□□□□□ -0.33
ARFGEF1-205ENST00000518789 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
ARFGEF1-205ENST00000518789 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.33
ARFGEF1-205ENST00000518789 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
ARFGEF1-205ENST00000518789 TJP1Q07157 1748 aa13.02□□□□□ -0.33
ARFGEF1-205ENST00000518789 PLIN1O60240 522 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 ITPK1Q13572 414 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 ERICH6BQ5W0A0 696 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 AK7Q96M32 723 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 ARXQ96QS3 562 aa13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-205ENST00000518789 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
ARFGEF1-205ENST00000518789 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 NBPF26B4DH59 902 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 RPS6KA4O75676 772 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
ARFGEF1-205ENST00000518789 AAMPQ13685 434 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 NBPF14Q5TI25 921 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
ARFGEF1-205ENST00000518789 NBPF15Q8N660 670 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 PLBD2Q8NHP8 589 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 HDAC5Q9UQL6 1122 aa13□□□□□ -0.33
ARFGEF1-205ENST00000518789 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
ARFGEF1-205ENST00000518789 ANXA1P04083 346 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 TRIM27P14373 513 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 G2E3Q7L622 706 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 FLAD1Q8NFF5 587 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
ARFGEF1-205ENST00000518789 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
ARFGEF1-205ENST00000518789 RGL2O15211 777 aa12.97□□□□□ -0.33
ARFGEF1-205ENST00000518789 GNPATO15228 680 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms