RNA–Protein interactions for RNA: ENST00000518574.1

SMIM19-207, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-207ENST00000518574 TM4SF1P30408 202 aa25.12■■□□□ 1.61
SMIM19-207ENST00000518574 USPL1Q5W0Q7 1092 aa25.12■■□□□ 1.61
SMIM19-207ENST00000518574 RSPH6AQ9H0K4 717 aa25.12■■□□□ 1.61
SMIM19-207ENST00000518574 GPBP1L1Q9HC44 474 aaPredicted RBP25.12■■□□□ 1.61
SMIM19-207ENST00000518574 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
SMIM19-207ENST00000518574 CEMIPQ8WUJ3 1361 aa25.11■■□□□ 1.61
SMIM19-207ENST00000518574 SENP3-EIF4A1A0A087X0R7 540 aa25.11■■□□□ 1.61
SMIM19-207ENST00000518574 PRKAR2BP31323 418 aa25.11■■□□□ 1.61
SMIM19-207ENST00000518574 ZNF790Q6PG37 636 aa25.11■■□□□ 1.61
SMIM19-207ENST00000518574 AFDNP55196 1824 aaKnown RBP25.11■■□□□ 1.61
SMIM19-207ENST00000518574 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
SMIM19-207ENST00000518574 STARD3NLO95772 234 aa25.1■■□□□ 1.61
SMIM19-207ENST00000518574 PHACTR3Q96KR7 559 aa25.1■■□□□ 1.61
SMIM19-207ENST00000518574 KCNA3P22001 575 aa25.09■■□□□ 1.61
SMIM19-207ENST00000518574 ZNF496Q96IT1 587 aaPredicted RBP25.09■■□□□ 1.61
SMIM19-207ENST00000518574 TEX13AQ9BXU3 409 aaPredicted RBP25.09■■□□□ 1.61
SMIM19-207ENST00000518574 HEG1Q9ULI3 1381 aa25.08■■□□□ 1.61
SMIM19-207ENST00000518574 FCHSD2O94868 740 aa25.08■■□□□ 1.61
SMIM19-207ENST00000518574 PIM2Q9P1W9 311 aa25.08■■□□□ 1.61
SMIM19-207ENST00000518574 NRXN2Q9P2S2 1712 aa25.08■■□□□ 1.61
SMIM19-207ENST00000518574 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
SMIM19-207ENST00000518574 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
SMIM19-207ENST00000518574 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.6
SMIM19-207ENST00000518574 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
SMIM19-207ENST00000518574 NFIXQ14938 502 aa25.05■■□□□ 1.6
SMIM19-207ENST00000518574 ARHGAP27Q6ZUM4 889 aa25.05■■□□□ 1.6
SMIM19-207ENST00000518574 ZNF526Q8TF50 670 aaPredicted RBP25.05■■□□□ 1.6
SMIM19-207ENST00000518574 FMNL2Q96PY5 1086 aa25.05■■□□□ 1.6
SMIM19-207ENST00000518574 A0A087WZG4 1122 aa25.04■■□□□ 1.6
SMIM19-207ENST00000518574 BCL2L12Q9HB09 334 aa25.04■■□□□ 1.6
SMIM19-207ENST00000518574 DALRD3Q5D0E6 543 aaKnown RBP25.03■■□□□ 1.6
SMIM19-207ENST00000518574 SCN7AQ01118 1682 aa25.02■■□□□ 1.6
SMIM19-207ENST00000518574 BTBD11A6QL63 1104 aa25.02■■□□□ 1.6
SMIM19-207ENST00000518574 CEP350Q5VT06 3117 aa25.02■■□□□ 1.6
SMIM19-207ENST00000518574 DLEC1Q9Y238 1755 aa25.01■■□□□ 1.59
SMIM19-207ENST00000518574 CHRNA5P30532 468 aa25.01■■□□□ 1.59
SMIM19-207ENST00000518574 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
SMIM19-207ENST00000518574 IL6STP40189 918 aaPredicted RBP25■■□□□ 1.59
SMIM19-207ENST00000518574 SERPINB2P05120 415 aa24.99■■□□□ 1.59
SMIM19-207ENST00000518574 SBF1O95248 1867 aa24.98■■□□□ 1.59
SMIM19-207ENST00000518574 KCNQ3O43525 872 aa24.97■■□□□ 1.59
SMIM19-207ENST00000518574 HTATSF1O43719 755 aaKnown RBP24.97■■□□□ 1.59
SMIM19-207ENST00000518574 MCM10Q7L590 875 aa24.96■■□□□ 1.59
SMIM19-207ENST00000518574 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
SMIM19-207ENST00000518574 DLG5Q8TDM6 1919 aa24.96■■□□□ 1.59
SMIM19-207ENST00000518574 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
SMIM19-207ENST00000518574 BCORQ6W2J9 1755 aa24.95■■□□□ 1.58
SMIM19-207ENST00000518574 KIF3CO14782 793 aa24.94■■□□□ 1.58
SMIM19-207ENST00000518574 A1BGP04217 495 aa24.94■■□□□ 1.58
SMIM19-207ENST00000518574 TBC1D2BQ9UPU7 963 aa24.94■■□□□ 1.58
SMIM19-207ENST00000518574 C9orf131Q5VYM1 1079 aa24.93■■□□□ 1.58
SMIM19-207ENST00000518574 BICDL1Q6ZP65 573 aa24.93■■□□□ 1.58
SMIM19-207ENST00000518574 ANKRD31Q8N7Z5 1873 aa24.93■■□□□ 1.58
SMIM19-207ENST00000518574 NEFMP07197 916 aa24.92■■□□□ 1.58
SMIM19-207ENST00000518574 TBC1D9BQ66K14 1250 aa24.92■■□□□ 1.58
SMIM19-207ENST00000518574 CARMIL3Q8ND23 1372 aa24.92■■□□□ 1.58
SMIM19-207ENST00000518574 SNRPA1P09661 255 aaKnown RBP24.91■■□□□ 1.58
SMIM19-207ENST00000518574 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
SMIM19-207ENST00000518574 H0YIN7 160 aa24.9■■□□□ 1.58
SMIM19-207ENST00000518574 DCTN1Q14203 1278 aa24.9■■□□□ 1.58
SMIM19-207ENST00000518574 C2CD5Q86YS7 1000 aa24.9■■□□□ 1.58
SMIM19-207ENST00000518574 CAMTA2O94983 1202 aa24.89■■□□□ 1.58
SMIM19-207ENST00000518574 TTLL6Q8N841 843 aa24.89■■□□□ 1.58
SMIM19-207ENST00000518574 PDZRN3Q9UPQ7 1066 aa24.89■■□□□ 1.58
SMIM19-207ENST00000518574 HSPA6P17066 643 aa24.88■■□□□ 1.57
SMIM19-207ENST00000518574 TAF7Q15545 349 aaPredicted RBP24.88■■□□□ 1.57
SMIM19-207ENST00000518574 DZIP3Q86Y13 1208 aaKnown RBP24.88■■□□□ 1.57
SMIM19-207ENST00000518574 RNF181Q9P0P0 153 aa24.88■■□□□ 1.57
SMIM19-207ENST00000518574 SETDB2Q96T68 719 aa24.87■■□□□ 1.57
SMIM19-207ENST00000518574 BRIP1Q9BX63 1249 aa24.87■■□□□ 1.57
SMIM19-207ENST00000518574 LAMB4A4D0S4 1761 aa24.87■■□□□ 1.57
SMIM19-207ENST00000518574 KDM3BQ7LBC6 1761 aa24.86■■□□□ 1.57
SMIM19-207ENST00000518574 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
SMIM19-207ENST00000518574 PDE6BP35913 854 aa24.86■■□□□ 1.57
SMIM19-207ENST00000518574 PRR5LQ6MZQ0 368 aa24.86■■□□□ 1.57
SMIM19-207ENST00000518574 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
SMIM19-207ENST00000518574 CCDC88AQ3V6T2 1871 aa24.85■■□□□ 1.57
SMIM19-207ENST00000518574 TOMM70O94826 608 aa24.85■■□□□ 1.57
SMIM19-207ENST00000518574 PLEKHF1Q96S99 279 aa24.85■■□□□ 1.57
SMIM19-207ENST00000518574 PNNQ9H307 717 aaKnown RBP24.85■■□□□ 1.57
SMIM19-207ENST00000518574 NMRK2Q9NPI5 230 aa24.85■■□□□ 1.57
SMIM19-207ENST00000518574 CLEC4GQ6UXB4 293 aa24.84■■□□□ 1.57
SMIM19-207ENST00000518574 ZC3H4Q9UPT8 1303 aaKnown RBP24.84■■□□□ 1.57
SMIM19-207ENST00000518574 TNRC6CQ9HCJ0 1690 aaKnown RBP24.83■■□□□ 1.57
SMIM19-207ENST00000518574 PIP4K2AP48426 406 aaPredicted RBP24.83■■□□□ 1.57
SMIM19-207ENST00000518574 CNBD1Q8NA66 436 aa24.83■■□□□ 1.57
SMIM19-207ENST00000518574 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
SMIM19-207ENST00000518574 ZNF652Q9Y2D9 606 aa24.83■■□□□ 1.57
SMIM19-207ENST00000518574 KDM2BQ8NHM5 1336 aa24.83■■□□□ 1.56
SMIM19-207ENST00000518574 RGL2O15211 777 aa24.82■■□□□ 1.56
SMIM19-207ENST00000518574 RASSF7Q02833 373 aa24.82■■□□□ 1.56
SMIM19-207ENST00000518574 NFE2L2Q16236 605 aa24.82■■□□□ 1.56
SMIM19-207ENST00000518574 NPHP1O15259 732 aa24.81■■□□□ 1.56
SMIM19-207ENST00000518574 LMNB1P20700 586 aa24.81■■□□□ 1.56
SMIM19-207ENST00000518574 NBPF26B4DH59 902 aa24.8■■□□□ 1.56
SMIM19-207ENST00000518574 ST5P78524 1137 aa24.8■■□□□ 1.56
SMIM19-207ENST00000518574 RALBP1Q15311 655 aa24.8■■□□□ 1.56
SMIM19-207ENST00000518574 NBPF10Q6P3W6 841 aaKnown RBP24.8■■□□□ 1.56
SMIM19-207ENST00000518574 NBPF15Q8N660 670 aa24.8■■□□□ 1.56
SMIM19-207ENST00000518574 ZNF622Q969S3 477 aaKnown RBP eCLIP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms