RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 TJP1Q07157 1748 aa8.39□□□□□ -1.07
SCUBE2-203ENST00000518447 ADCY9O60503 1353 aa8.38□□□□□ -1.07
SCUBE2-203ENST00000518447 TNNT2P45379 298 aaPredicted RBP8.38□□□□□ -1.07
SCUBE2-203ENST00000518447 ITPK1Q13572 414 aa8.38□□□□□ -1.07
SCUBE2-203ENST00000518447 PIGBQ92521 554 aa8.38□□□□□ -1.07
SCUBE2-203ENST00000518447 MYH14Q7Z406 1995 aaKnown RBP8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 IGSF1Q8N6C5 1336 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 DOK7Q18PE1 504 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 AK7Q96M32 723 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 POLR3GLQ9BT43 218 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 ASAP1Q9ULH1 1129 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 PCDHB8Q9UN66 801 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 PXDNLA1KZ92 1463 aa8.37□□□□□ -1.07
SCUBE2-203ENST00000518447 TMF1P82094 1093 aa8.36□□□□□ -1.07
SCUBE2-203ENST00000518447 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
SCUBE2-203ENST00000518447 KDRP35968 1356 aa8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 ADAMTS7Q9UKP4 1686 aa8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 GNPATO15228 680 aa8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 EYA1Q99502 592 aa8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 KDM6AO15550 1401 aaPredicted RBP8.35□□□□□ -1.07
SCUBE2-203ENST00000518447 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 SIK1P57059 783 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 GOLGA2Q08379 1002 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 PLCD3Q8N3E9 789 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 PCNTO95613 3336 aa8.34□□□□□ -1.07
SCUBE2-203ENST00000518447 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 MMP10P09238 476 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 PHKG2P15735 406 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 WDR90Q96KV7 1748 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 TMOD3Q9NYL9 352 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
SCUBE2-203ENST00000518447 C10orf71Q711Q0 1435 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 PYGBP11216 843 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 POLKQ9UBT6 870 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 KIF24Q5T7B8 1368 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 TIAM2Q8IVF5 1701 aa8.32□□□□□ -1.08
SCUBE2-203ENST00000518447 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 SMARCC1Q92922 1105 aaPredicted RBP8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 ZBTB47Q9UFB7 747 aaPredicted RBP8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 SPG7Q9UQ90 795 aa8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 CACNA1SQ13698 1873 aa8.31□□□□□ -1.08
SCUBE2-203ENST00000518447 WASHC2AQ641Q2 1341 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 KIF3CO14782 793 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 RIMBP2O15034 1052 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 SSFA2P28290 1259 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 HTRA3P83110 453 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 SRP68Q9UHB9 627 aaKnown RBP8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 SBF1O95248 1867 aa8.3□□□□□ -1.08
SCUBE2-203ENST00000518447 COL11A2P13942 1736 aaPredicted RBP8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 PTCD1O75127 700 aaKnown RBP8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 NMRK2Q9NPI5 230 aa8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 CCDC88AQ3V6T2 1871 aa8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
SCUBE2-203ENST00000518447 UBR2Q8IWV8 1755 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 GYS1P13807 737 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 DPEP1P16444 411 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 HSPA6P17066 643 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 IFFO2Q5TF58 517 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 DPY19L2Q6NUT2 758 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 ANKRD31Q8N7Z5 1873 aa8.28□□□□□ -1.08
SCUBE2-203ENST00000518447 TNRC6CQ9HCJ0 1690 aaKnown RBP8.27□□□□□ -1.08
SCUBE2-203ENST00000518447 DDR1Q08345 913 aa8.27□□□□□ -1.09
SCUBE2-203ENST00000518447 NRXN2Q9P2S2 1712 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 SIPA1L3O60292 1781 aaPredicted RBP8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 HSPA5P11021 654 aaKnown RBP8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 CHRNA5P30532 468 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 FKBP8Q14318 412 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 ARHGAP27Q6ZUM4 889 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 PANK3Q9H999 370 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 HCSTQ9UBK5 93 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 CNTNAP4Q9C0A0 1308 aa8.26□□□□□ -1.09
SCUBE2-203ENST00000518447 CARMIL3Q8ND23 1372 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 G3V3G9 751 aa8.25□□□□□ -1.09
SCUBE2-203ENST00000518447 FCHSD2O94868 740 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms