RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 RALGAPBQ86X10 1494 aa8.55□□□□□ -1.04
MRPS28-203ENST00000518371 MED1Q15648 1581 aaPredicted RBP8.55□□□□□ -1.04
MRPS28-203ENST00000518371 ACEP12821 1306 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 ARHGEF28Q8N1W1 1705 aaKnown RBP8.54□□□□□ -1.04
MRPS28-203ENST00000518371 ADGRB2O60241 1585 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 TERTO14746 1132 aaKnown RBP8.54□□□□□ -1.04
MRPS28-203ENST00000518371 ADH1BP00325 375 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 GPIHBP1Q8IV16 184 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
MRPS28-203ENST00000518371 PXDNQ92626 1479 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 ZNF772Q68DY9 489 aaPredicted RBP8.53□□□□□ -1.04
MRPS28-203ENST00000518371 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 CABLES1Q8TDN4 633 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 SLC6A16Q9GZN6 736 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
MRPS28-203ENST00000518371 NHSL1Q5SYE7 1610 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
MRPS28-203ENST00000518371 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
MRPS28-203ENST00000518371 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
MRPS28-203ENST00000518371 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
MRPS28-203ENST00000518371 POTEAQ6S8J7 498 aa8.52□□□□□ -1.05
MRPS28-203ENST00000518371 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
MRPS28-203ENST00000518371 AFF2P51816 1311 aa8.52□□□□□ -1.05
MRPS28-203ENST00000518371 ATP7BP35670 1465 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 ATAD2Q6PL18 1390 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 USP47Q96K76 1375 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 KIF1AQ12756 1690 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 TMF1P82094 1093 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
MRPS28-203ENST00000518371 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 TESK2Q96S53 571 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 TNS3Q68CZ2 1445 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 LRP6O75581 1613 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 USP32Q8NFA0 1604 aa8.51□□□□□ -1.05
MRPS28-203ENST00000518371 POLR3AO14802 1390 aaPredicted RBP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
MRPS28-203ENST00000518371 EIF4G2P78344 907 aaKnown RBP eCLIP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 CDCA8Q53HL2 280 aa8.5□□□□□ -1.05
MRPS28-203ENST00000518371 HDGFL2Q7Z4V5 671 aaPredicted RBP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 NLRP13Q86W25 1043 aa8.5□□□□□ -1.05
MRPS28-203ENST00000518371 PUS7Q96PZ0 661 aaKnown RBP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 SLC12A5Q9H2X9 1139 aa8.5□□□□□ -1.05
MRPS28-203ENST00000518371 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 USP21Q9UK80 565 aa8.5□□□□□ -1.05
MRPS28-203ENST00000518371 RGPD8O14715 1765 aaPredicted RBP8.5□□□□□ -1.05
MRPS28-203ENST00000518371 SHPRHQ149N8 1683 aa8.49□□□□□ -1.05
MRPS28-203ENST00000518371 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
MRPS28-203ENST00000518371 RXRBP28702 533 aa8.49□□□□□ -1.05
MRPS28-203ENST00000518371 TERF2IPQ9NYB0 399 aa8.49□□□□□ -1.05
MRPS28-203ENST00000518371 QRICH2Q9H0J4 1663 aa8.49□□□□□ -1.05
MRPS28-203ENST00000518371 DDX11L8A8MPP1 907 aa8.48□□□□□ -1.05
MRPS28-203ENST00000518371 NR1I2O75469 434 aa8.48□□□□□ -1.05
MRPS28-203ENST00000518371 HSPA5P11021 654 aaKnown RBP8.48□□□□□ -1.05
MRPS28-203ENST00000518371 RPIAP49247 311 aa8.48□□□□□ -1.05
MRPS28-203ENST00000518371 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
MRPS28-203ENST00000518371 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
MRPS28-203ENST00000518371 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
MRPS28-203ENST00000518371 KTN1Q86UP2 1357 aaKnown RBP8.48□□□□□ -1.05
MRPS28-203ENST00000518371 FAM83GA6ND36 823 aa8.47□□□□□ -1.05
MRPS28-203ENST00000518371 CD2BP2O95400 341 aaKnown RBP8.47□□□□□ -1.05
MRPS28-203ENST00000518371 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
MRPS28-203ENST00000518371 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
MRPS28-203ENST00000518371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
MRPS28-203ENST00000518371 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
MRPS28-203ENST00000518371 RDH13Q8NBN7 331 aa8.47□□□□□ -1.05
MRPS28-203ENST00000518371 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
MRPS28-203ENST00000518371 TRPC5Q9UL62 973 aaPredicted RBP8.47□□□□□ -1.05
MRPS28-203ENST00000518371 TTC21BQ7Z4L5 1316 aa8.47□□□□□ -1.05
MRPS28-203ENST00000518371 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
MRPS28-203ENST00000518371 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.06
MRPS28-203ENST00000518371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.46□□□□□ -1.06
MRPS28-203ENST00000518371 UNC5CLQ8IV45 518 aa8.46□□□□□ -1.06
MRPS28-203ENST00000518371 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
MRPS28-203ENST00000518371 USP6P35125 1406 aa8.46□□□□□ -1.06
MRPS28-203ENST00000518371 IRF6O14896 467 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 GCP02774 474 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 TTC21AQ8NDW8 1320 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 ITSN1Q15811 1721 aa8.45□□□□□ -1.06
MRPS28-203ENST00000518371 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
MRPS28-203ENST00000518371 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
MRPS28-203ENST00000518371 SOCS7O14512 581 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 EVA1CP58658 441 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 FUT2Q10981 343 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 KCNH5Q8NCM2 988 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 TRIM47Q96LD4 638 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 BTG4Q9NY30 223 aa8.44□□□□□ -1.06
MRPS28-203ENST00000518371 CPSF1Q10570 1443 aaKnown RBP8.44□□□□□ -1.06
MRPS28-203ENST00000518371 GCGRP47871 477 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 MORN1Q5T089 497 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 NME9Q86XW9 330 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
MRPS28-203ENST00000518371 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
MRPS28-203ENST00000518371 KIAA0232Q92628 1395 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms