RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 USPL1Q5W0Q7 1092 aa18.83■□□□□ 0.6
TVP23C-205ENST00000518321 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
TVP23C-205ENST00000518321 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
TVP23C-205ENST00000518321 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
TVP23C-205ENST00000518321 NARFQ9UHQ1 456 aa18.82■□□□□ 0.6
TVP23C-205ENST00000518321 COL15A1P39059 1388 aa18.81■□□□□ 0.6
TVP23C-205ENST00000518321 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
TVP23C-205ENST00000518321 TEFQ10587 303 aa18.81■□□□□ 0.6
TVP23C-205ENST00000518321 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
TVP23C-205ENST00000518321 ARFGEF1Q9Y6D6 1849 aa18.8■□□□□ 0.6
TVP23C-205ENST00000518321 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
TVP23C-205ENST00000518321 UBR2Q8IWV8 1755 aa18.8■□□□□ 0.6
TVP23C-205ENST00000518321 KIF3CO14782 793 aa18.79■□□□□ 0.6
TVP23C-205ENST00000518321 STARD3NLO95772 234 aa18.79■□□□□ 0.6
TVP23C-205ENST00000518321 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
TVP23C-205ENST00000518321 HSPA6P17066 643 aa18.78■□□□□ 0.6
TVP23C-205ENST00000518321 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
TVP23C-205ENST00000518321 IL17REQ8NFR9 667 aa18.78■□□□□ 0.6
TVP23C-205ENST00000518321 CHRNA5P30532 468 aa18.77■□□□□ 0.6
TVP23C-205ENST00000518321 NFIXQ14938 502 aa18.77■□□□□ 0.6
TVP23C-205ENST00000518321 ZNF790Q6PG37 636 aa18.77■□□□□ 0.6
TVP23C-205ENST00000518321 C9orf131Q5VYM1 1079 aa18.76■□□□□ 0.59
TVP23C-205ENST00000518321 ZNF496Q96IT1 587 aaPredicted RBP18.76■□□□□ 0.59
TVP23C-205ENST00000518321 TEX13AQ9BXU3 409 aaPredicted RBP18.76■□□□□ 0.59
TVP23C-205ENST00000518321 A0A087WZG4 1122 aa18.75■□□□□ 0.59
TVP23C-205ENST00000518321 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
TVP23C-205ENST00000518321 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
TVP23C-205ENST00000518321 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
TVP23C-205ENST00000518321 AFDNP55196 1824 aaKnown RBP18.74■□□□□ 0.59
TVP23C-205ENST00000518321 SERPINB2P05120 415 aa18.74■□□□□ 0.59
TVP23C-205ENST00000518321 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
TVP23C-205ENST00000518321 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
TVP23C-205ENST00000518321 CEP350Q5VT06 3117 aa18.74■□□□□ 0.59
TVP23C-205ENST00000518321 NRXN2Q9P2S2 1712 aa18.74■□□□□ 0.59
TVP23C-205ENST00000518321 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
TVP23C-205ENST00000518321 CEMIPQ8WUJ3 1361 aa18.73■□□□□ 0.59
TVP23C-205ENST00000518321 FMNL2Q96PY5 1086 aa18.73■□□□□ 0.59
TVP23C-205ENST00000518321 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
TVP23C-205ENST00000518321 TOMM70O94826 608 aa18.72■□□□□ 0.59
TVP23C-205ENST00000518321 PHACTR3Q96KR7 559 aa18.72■□□□□ 0.59
TVP23C-205ENST00000518321 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
TVP23C-205ENST00000518321 NMRK2Q9NPI5 230 aa18.71■□□□□ 0.59
TVP23C-205ENST00000518321 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
TVP23C-205ENST00000518321 BTBD11A6QL63 1104 aa18.7■□□□□ 0.58
TVP23C-205ENST00000518321 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
TVP23C-205ENST00000518321 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
TVP23C-205ENST00000518321 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
TVP23C-205ENST00000518321 BICDL1Q6ZP65 573 aa18.7■□□□□ 0.58
TVP23C-205ENST00000518321 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
TVP23C-205ENST00000518321 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
TVP23C-205ENST00000518321 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
TVP23C-205ENST00000518321 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
TVP23C-205ENST00000518321 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 H0YIN7 160 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 NCBP3Q53F19 620 aaKnown RBP18.68■□□□□ 0.58
TVP23C-205ENST00000518321 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 TTLL6Q8N841 843 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 TBC1D2BQ9UPU7 963 aa18.68■□□□□ 0.58
TVP23C-205ENST00000518321 SBF1O95248 1867 aa18.67■□□□□ 0.58
TVP23C-205ENST00000518321 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
TVP23C-205ENST00000518321 A1BGP04217 495 aa18.67■□□□□ 0.58
TVP23C-205ENST00000518321 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
TVP23C-205ENST00000518321 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
TVP23C-205ENST00000518321 KCNQ3O43525 872 aa18.66■□□□□ 0.58
TVP23C-205ENST00000518321 APLP1P51693 650 aa18.66■□□□□ 0.58
TVP23C-205ENST00000518321 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
TVP23C-205ENST00000518321 RASSF7Q02833 373 aa18.65■□□□□ 0.58
TVP23C-205ENST00000518321 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
TVP23C-205ENST00000518321 LMNB1P20700 586 aa18.64■□□□□ 0.57
TVP23C-205ENST00000518321 PDE6BP35913 854 aa18.64■□□□□ 0.57
TVP23C-205ENST00000518321 MCM10Q7L590 875 aa18.64■□□□□ 0.57
TVP23C-205ENST00000518321 RBM46Q8TBY0 533 aaKnown RBP18.64■□□□□ 0.57
TVP23C-205ENST00000518321 BRIP1Q9BX63 1249 aa18.64■□□□□ 0.57
TVP23C-205ENST00000518321 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
TVP23C-205ENST00000518321 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
TVP23C-205ENST00000518321 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
TVP23C-205ENST00000518321 PRR5LQ6MZQ0 368 aa18.63■□□□□ 0.57
TVP23C-205ENST00000518321 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
TVP23C-205ENST00000518321 USP16Q9Y5T5 823 aa18.63■□□□□ 0.57
TVP23C-205ENST00000518321 NPHP1O15259 732 aa18.62■□□□□ 0.57
TVP23C-205ENST00000518321 DZIP3Q86Y13 1208 aaKnown RBP18.62■□□□□ 0.57
TVP23C-205ENST00000518321 ZNF622Q969S3 477 aaKnown RBP eCLIP18.62■□□□□ 0.572e-8■□□□□ 10.5
TVP23C-205ENST00000518321 RRAGCQ9HB90 399 aa18.62■□□□□ 0.57
TVP23C-205ENST00000518321 ANKRD31Q8N7Z5 1873 aa18.61■□□□□ 0.57
TVP23C-205ENST00000518321 TNRC6CQ9HCJ0 1690 aaKnown RBP18.61■□□□□ 0.57
TVP23C-205ENST00000518321 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
TVP23C-205ENST00000518321 NEFMP07197 916 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 ST5P78524 1137 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 FSTL1Q12841 308 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 CCDC24Q8N4L8 307 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
TVP23C-205ENST00000518321 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
TVP23C-205ENST00000518321 NFKBIEO00221 500 aa18.59■□□□□ 0.57
TVP23C-205ENST00000518321 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
TVP23C-205ENST00000518321 CLEC4GQ6UXB4 293 aa18.59■□□□□ 0.57
TVP23C-205ENST00000518321 ZNF652Q9Y2D9 606 aa18.59■□□□□ 0.57
TVP23C-205ENST00000518321 HOXD11P31277 338 aaPredicted RBP18.58■□□□□ 0.56
TVP23C-205ENST00000518321 PRELPP51888 382 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms